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H2BC27P H2B clustered histone 27, pseudogene [ Homo sapiens (human) ]

Gene ID: 337872, updated on 10-Oct-2023

Summary

Official Symbol
H2BC27Pprovided by HGNC
Official Full Name
H2B clustered histone 27, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:20515
See related
Ensembl:ENSG00000181201 AllianceGenome:HGNC:20515
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
H2BU2P; HIST3H2BA
Summary
Histones are basic nuclear proteins responsible for nucleosome structure of the chromosomal fiber in eukaryotes. Two molecules of each of the four core histones (H2A, H2B, H3, and H4) form an octamer, around which approximately 146 bp of DNA is wrapped in repeating units, called nucleosomes. The linker histone, H1, interacts with linker DNA between nucleosomes and functions in the compaction of chromatin into higher order structures. This gene is a histone pseudogene found on chromosome 1. [provided by RefSeq, Oct 2015]
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Genomic context

See H2BC27P in Genome Data Viewer
Location:
1q42.13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (228464170..228464575, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (227652682..227653087, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (228651871..228652276, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:228645697-228646283 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:228646284-228646869 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2695 Neighboring gene H2B clustered histone 26 Neighboring gene microRNA 4666a Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228658552-228659062 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228663712-228664547 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228673961-228674822 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:228674823-228675683 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228675801-228676529 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228676530-228677257 Neighboring gene Sharpr-MPRA regulatory region 4602 Neighboring gene ring finger protein 187 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:228680575-228681520 Neighboring gene Sharpr-MPRA regulatory region 4759 Neighboring gene uncharacterized LOC105373124 Neighboring gene butyrophilin like 10, pseudogene

Genomic regions, transcripts, and products

General gene information

Markers

Other Names

  • H2B.U histone 2, pseudogene
  • histone 3, H2ba
  • histone cluster 3 H2B family member a (pseudogene)
  • histone cluster 3, H2ba (pseudogene)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002618.3 

    Range
    101..506
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    228464170..228464575 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_018654708.1 Reference GRCh38.p14 PATCHES

    Range
    55369..55774 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    227652682..227653087 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)