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mcm4 minichromosome maintenance complex component 4 [ Danio rerio (zebrafish) ]

Gene ID: 337598, updated on 17-Nov-2020

Summary

Official Symbol
mcm4provided by ZNC
Official Full Name
minichromosome maintenance complex component 4provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-9544
See related
Ensembl:ENSDARG00000040041
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
cb1025; fc12c09; fj85g09; zeh1616; hm:zeh1616; wu:fc12c09; wu:fj85g09
Orthologs

Genomic context

See mcm4 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
17
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (35536662..35561672, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (35648565..35673575, complement)
103 previous assembly Zv9 (GCF_000002035.4) 24 NC_007135.5 (37031303..37056313, complement)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene snail family zinc finger 2 Neighboring gene ubiquitin-conjugating enzyme E2 variant 2 Neighboring gene CCAAT enhancer binding protein delta Neighboring gene scaffold protein involved in DNA repair

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
DNA binding IEA
Inferred from Electronic Annotation
more info
 
DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 
DNA replication origin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
chromatin binding IDA
Inferred from Direct Assay
more info
PubMed 
helicase activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
single-stranded DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
DNA replication IEA
Inferred from Electronic Annotation
more info
 
DNA replication initiation IEA
Inferred from Electronic Annotation
more info
 
DNA strand elongation involved in DNA replication IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA unwinding involved in DNA replication IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cell cycle IEA
Inferred from Electronic Annotation
more info
 
double-strand break repair via break-induced replication IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mitotic DNA replication initiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
pre-replicative complex assembly involved in nuclear cell cycle DNA replication IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
response to yeast IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
MCM complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
MCM complex IEA
Inferred from Electronic Annotation
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
DNA replication licensing factor MCM4
Names
MCM4 minichromosome maintenance deficient 4, mitotin
NP_944595.2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198913.2NP_944595.2  DNA replication licensing factor MCM4

    See identical proteins and their annotated locations for NP_944595.2

    Status: PROVISIONAL

    Source sequence(s)
    BC065958
    UniProtKB/TrEMBL
    Q6NZV2
    Related
    ENSDARP00000058563.2, ENSDART00000058564.4
    Conserved Domains (3) summary
    smart00350
    Location:249752
    MCM; minichromosome maintenance proteins
    pfam14551
    Location:147269
    MCM_N; MCM N-terminal domain
    cl21455
    Location:487626
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    35536662..35561672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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