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Rpn11 Regulatory particle non-ATPase 11 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33738, updated on 26-Aug-2021

Summary

Official Symbol
Rpn11provided by FlyBase
Official Full Name
Regulatory particle non-ATPase 11provided by FlyBase
Primary source
FLYBASE:FBgn0028694
Locus tag
Dmel_CG18174
Gene type
protein coding
RNA name
regulatory particle non-ATPase 11
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
37B; CG18174; Dmel\CG18174; DmS13; p37B; PSMD14; Q9V3H2; rpn11; RPn11; RPN11; S13; yip5
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Genomic context

See Rpn11 in Genome Data Viewer
Location:
25C3-25C3; 2-15 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (5058404..5059790, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (5058404..5059790, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Histone H3.3A Neighboring gene Neprilysin-like 3 Neighboring gene long non-coding RNA:CR45291 Neighboring gene antisense RNA:CR43820 Neighboring gene quick-to-court

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

  • Homologs of the Rpn11 gene: The Rpn11 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables Lys63-specific deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 
enables isopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
enables metallopeptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables proteasome binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables thiol-dependent deubiquitinase IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of proteasome complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of proteasome regulatory particle IDA
Inferred from Direct Assay
more info
PubMed 
part_of proteasome regulatory particle, lid subcomplex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of proteasome regulatory particle, lid subcomplex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
regulatory particle non-ATPase 11
Names
CG18174-PA
Rpn11-PA
yippee interacting protein 5

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    5058404..5059790 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_135061.4NP_608905.1  regulatory particle non-ATPase 11 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608905.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9V3H2
    Related
    FBpp0078664, FBtr0079027
    Conserved Domains (1) summary
    cd08069
    Location:19284
    MPN_RPN11_CSN5; Mov34/MPN/PAD-1 family: proteasomal regulatory protein Rpn11 and signalosome complex subunit CSN5
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