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cgd7_1490 tryptophanyl-tRNA synthetase [ Cryptosporidium parvum Iowa II ]

Gene ID: 3372249, updated on 17-May-2024
Gene symbol
cgd7_1490
Gene description
tryptophanyl-tRNA synthetase
Locus tag
cgd7_1490
See related
ApiDB_CryptoDB:cgd7_1490; CryptoDB:cgd7_1490; VEuPathDB:cgd7_1490
Gene type
protein coding
RNA name
tryptophanyl-tRNA synthetase
RefSeq status
PROVISIONAL
Organism
Cryptosporidium parvum Iowa II (isolate: Iowa type II)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
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Try the new Transcripts and proteins table
See cgd7_1490 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_006986.1 (378391..380172)

Chromosome 7 - NC_006986.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic Sequence:
NC_006986.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Crystal structures of three protozoan homologs of tryptophanyl-tRNA synthetase. Merritt EA, et al. Mol Biochem Parasitol, 2011 May. PMID 21255615, Free PMC Article
  2. Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Abrahamsen MS, et al. Science, 2004 Apr 16. PMID 15044751
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. TrpRS gene codes an N-terminal domain of uncertain function in addition to the conserved core TrpRS domains.
    Title: Crystal structures of three protozoan homologs of tryptophanyl-tRNA synthetase.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tryptophan-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophanyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
Names
tryptophanyl-tRNA synthetase

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006986.1 Reference assembly

    Range
    378391..380172
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_628330.1 → XP_628332.1  tryptophanyl-tRNA synthetase [Cryptosporidium parvum Iowa II]

    See identical proteins and their annotated locations for XP_628332.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0X4V6, Q5CYP8
    Conserved Domains (1) summary
    cl00015
    Location:202 → 577
    nt_trans; nucleotidyl transferase superfamily
Nucleotide Protein
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