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cgd7_480 lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase [ Cryptosporidium parvum Iowa II ]

Gene ID: 3371768, updated on 17-May-2024

Summary

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Gene symbol
cgd7_480
Gene description
lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase
Locus tag
cgd7_480
See related
ApiDB_CryptoDB:cgd7_480; CryptoDB:cgd7_480; VEuPathDB:cgd7_480
Gene type
protein coding
RNA name
lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase
RefSeq status
PROVISIONAL
Organism
Cryptosporidium parvum Iowa II (isolate: Iowa type II)
Lineage
Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Cryptosporidiidae; Cryptosporidium
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Genomic context

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See cgd7_480 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_006986.1 (117820..118833, complement)

Chromosome 7 - NC_006986.1Genomic Context describing neighboring genes Neighboring gene P-type ATpase 3; integral membrane protein with signal peptide and 12 or more transmembrane domains; possible MgtA, cation tranport ATpase. Neighboring gene malate dehydrogenase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006986.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete genome sequence of the apicomplexan, Cryptosporidium parvum. Abrahamsen MS, et al. Science, 2004 Apr 16. PMID 15044751
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase
XP_628238.1
  • transcripts identified by EST

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006986.1 Reference assembly

    Range
    117820..118833 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_628236.1 → XP_628238.1  lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase [Cryptosporidium parvum Iowa II]

    See identical proteins and their annotated locations for XP_628238.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F0X3G4, Q5CYZ2
    Conserved Domains (2) summary
    cd01339
    Location:23 → 322
    LDH-like_MDH; L-lactate dehydrogenase-like malate dehydrogenase proteins
    PTZ00082
    Location:15 → 330
    PTZ00082; L-lactate dehydrogenase; Provisional
Nucleotide Protein
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