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ranbp1 RAN binding protein 1 [ Danio rerio (zebrafish) ]

Gene ID: 337046, updated on 14-Feb-2019

Summary

Official Symbol
ranbp1provided by ZNC
Official Full Name
RAN binding protein 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-040426-2548
See related
Ensembl:ENSDARG00000014817
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
zeh1094; zgc:85649; hm:zeh1094; wu:fa96a09; wu:fj39g07
Orthologs

Genomic context

See ranbp1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (19006701..19014656, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (18502909..18510864, complement)
103 previous assembly Zv9 (GCF_000002035.4) 5 NC_007116.5 (20790452..20798405, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and LEM domain containing 2 Neighboring gene golgin A3 Neighboring gene family with sequence similarity 214 member B Neighboring gene family with sequence similarity 214 member B

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
contributes_to GTPase activator activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Ran GTPase binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
intracellular transport IEA
Inferred from Electronic Annotation
more info
 
positive regulation of mitotic centrosome separation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
centrosome IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nuclear pore IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
ran-specific GTPase-activating protein

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_212766.2NP_997931.2  ran-specific GTPase-activating protein

    See identical proteins and their annotated locations for NP_997931.2

    Status: VALIDATED

    Source sequence(s)
    CR388061, EH549160, EH562192
    UniProtKB/TrEMBL
    Q6NWK3
    Related
    ENSDARP00000025538.8, ENSDART00000002624.10
    Conserved Domains (1) summary
    cd13179
    Location:24160
    RanBD_RanBP1; Ran-binding domain

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    19006701..19014656 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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