U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

rpl21 ribosomal protein L21 [ Danio rerio (zebrafish) ]

Gene ID: 336568, updated on 14-May-2025
Official Symbol
rpl21provided by ZNC
Official Full Name
ribosomal protein L21provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-8512
See related
Ensembl:ENSDARG00000010516 AllianceGenome:ZFIN:ZDB-GENE-030131-8512
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:86669; wu:fb13h07; wu:fc74e02
Summary
Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Is expressed in endodermal cell; intestine; liver; and pancreas. Human ortholog(s) of this gene implicated in hypotrichosis 12. Orthologous to human RPL21 (ribosomal protein L21). [provided by Alliance of Genome Resources, May 2025]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table
See rpl21 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2025_04 current GRCz12tu (GCF_049306965.1) 24 NC_133199.1 (25502290..25506110)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) 24 NC_007135.7 (21621701..21625521)

Chromosome 24 - NC_133199.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 12 Neighboring gene uncharacterized LOC141380677 Neighboring gene ubiquitin specific peptidase 12a Neighboring gene general transcription factor IIIA, b Neighboring gene uncharacterized LOC141380678 Neighboring gene ligand of numb-protein X 2a

Go to nucleotide: Graphics FASTA GenBank

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Related articles in PubMed

  1. Multiple ribosomal proteins are expressed at high levels in developing zebrafish endoderm and are required for normal exocrine pancreas development. Provost E, et al. Zebrafish, 2013 Jun. PMID 23697888, Free PMC Article
  2. Duplication and subfunctionalisation of the general transcription factor IIIA (gtf3a) gene in teleost genomes, with ovarian specific transcription of gtf3ab. Rojo-Bartolomé I, et al. PLoS One, 2020. PMID 31999691, Free PMC Article
  3. A combined FSTRA-shotgun proteomics approach to identify molecular changes in zebrafish upon chemical exposure. Ayobahan SU, et al. Sci Rep, 2019 Apr 29. PMID 31036921, Free PMC Article
  4. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  
Preferred Names
large ribosomal subunit protein eL21
NP_001002155.1

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002155.1 → NP_001002155.1  large ribosomal subunit protein eL21

    See identical proteins and their annotated locations for NP_001002155.1

    Status: PROVISIONAL

    Source sequence(s)
    BC071354
    UniProtKB/TrEMBL
    A0A8M1MZZ4, Q6IQQ0
    Related
    ENSDARP00000016158.5, ENSDART00000002595.7
    Conserved Domains (2) summary
    PTZ00189
    Location:1 → 160
    PTZ00189; 60S ribosomal protein L21; Provisional
    pfam01157
    Location:5 → 97
    Ribosomal_L21e; Ribosomal protein L21e

RefSeqs of Annotated Genomes: GCF_049306965.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz12tu Primary Assembly

Genomic

  1. NC_133199.1 Reference GRCz12tu Primary Assembly

    Range
    25502290..25506110
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.