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CG3652 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33643, updated on 4-Apr-2024

Summary

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Official Symbol
CG3652provided by FlyBase
Primary source
FLYBASE:FBgn0031600
Locus tag
Dmel_CG3652
See related
AllianceGenome:FB:FBgn0031600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG3652
Summary
Predicted to be located in membrane. Predicted to be active in trans-Golgi network. Is expressed in adult head. Orthologous to human YIPF6 (Yip1 domain family member 6). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
24E5-24E5; 2-12 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (4392770..4393876, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (4392770..4393876, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Vacuolar protein sorting 53 Neighboring gene Partner of Sld Five 2 Neighboring gene Trehalose-6-phosphate synthase 1 Neighboring gene lethal (2) k05819 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A small genomic region containing several loci required for gastrulation in Drosophila. Mathew SJ, et al. PLoS One, 2009 Oct 13. PMID 19823683, Free PMC Article
  2. Autocrine insulin pathway signaling regulates actin dynamics in cell wound repair. Nakamura M, et al. PLoS Genet, 2020 Dec. PMID 33306674, Free PMC Article
  3. Expression profiling of a hypercontraction-induced myopathy in Drosophila suggests a compensatory cytoskeletal remodeling response. Montana ES, et al. J Biol Chem, 2006 Mar 24. PMID 16415344
  4. Genome-wide measurement of spatial expression in patterning mutants of Drosophila melanogaster. Combs PA, et al. F1000Res, 2017. PMID 28299188, Free PMC Article
  5. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article

See all (27) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in trans-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG3652-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    4392770..4393876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134984.4 → NP_608828.2  uncharacterized protein Dmel_CG3652 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608828.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0APR8, C0MKC7, Q9VQZ0
    Related
    FBpp0077149
    Conserved Domains (1) summary
    cl21557
    Location:31 → 221
    Yip1; Yip1 domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9VQZ0 Q9VQZ0

Gene LinkOut

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