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abcc5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [ Danio rerio (zebrafish) ]

Gene ID: 336147, updated on 14-Feb-2019

Summary

Official Symbol
abcc5provided by ZNC
Official Full Name
ATP-binding cassette, sub-family C (CFTR/MRP), member 5provided by ZNC
Primary source
ZFIN:ZDB-GENE-050517-17
See related
Ensembl:ENSDARG00000061233
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
fj51h02; wu:fj51h02; si:ch1073-183g13.2
Orthologs

Genomic context

See abcc5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
29
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (45791971..45852728)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (45795150..45856637)
103 previous assembly Zv9 (GCF_000002035.4) 18 NC_007129.5 (44210215..44233394) , (44235546..44266698)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene si:dkey-34o23.3 Neighboring gene ribosomal protein L35a Neighboring gene arginyl aminopeptidase like 1 Neighboring gene dishevelled segment polarity protein 3

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
ATPase activity IEA
Inferred from Electronic Annotation
more info
 
ATPase activity, coupled to transmembrane movement of substances IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
ATPase activity, coupled to transmembrane movement of substances IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
erythrocyte differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
heme transmembrane transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
organic anion transport IEA
Inferred from Electronic Annotation
more info
 
transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
multidrug resistance-associated protein 5
Names
mrp5

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001195613.1NP_001182542.1  multidrug resistance-associated protein 5

    See identical proteins and their annotated locations for NP_001182542.1

    Status: PROVISIONAL

    Source sequence(s)
    HQ161064
    UniProtKB/TrEMBL
    E1B2R7
    Related
    ENSDARP00000081504.4, ENSDART00000087070.7
    Conserved Domains (4) summary
    cd03244
    Location:11801400
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:552751
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    TIGR01271
    Location:951419
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    cl00549
    Location:8511132
    ABC_membrane; ABC transporter transmembrane region

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    45791971..45852728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017351905.2XP_017207394.1  multidrug resistance-associated protein 5 isoform X1

    UniProtKB/TrEMBL
    E7EYG0
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