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capu cappuccino [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33611, updated on 4-Jul-2019

Summary

Official Symbol
capuprovided by FlyBase
Official Full Name
cappuccinoprovided by FlyBase
Primary source
FLYBASE:FBgn0000256
Locus tag
Dmel_CG3399
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
capp; Capu; CG15420; CG3399; Dmel\CG3399

Genomic context

See capu in Genome Data Viewer
Location:
24C8-24C9; 2-11 cM
Exon count:
14
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3872646..3902860, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3872646..3902860, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Tubulin tyrosine ligase-like 4B Neighboring gene uncharacterized protein Neighboring gene Centrosomal protein 97kDa Neighboring gene friend of echinoid Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
actin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule binding IDA
Inferred from Direct Assay
more info
PubMed 
microtubule binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
actin filament organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
actin filament-based process IDA
Inferred from Direct Assay
more info
PubMed 
actin nucleation IDA
Inferred from Direct Assay
more info
PubMed 
chorion-containing eggshell formation HMP PubMed 
oogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
oogenesis TAS
Traceable Author Statement
more info
PubMed 
pole plasm RNA localization IMP
Inferred from Mutant Phenotype
more info
PubMed 
pole plasm assembly HMP PubMed 
pole plasm assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
pole plasm assembly NAS
Non-traceable Author Statement
more info
PubMed 
pole plasm assembly TAS
Traceable Author Statement
more info
PubMed 
pole plasm oskar mRNA localization TAS
Traceable Author Statement
more info
PubMed 
positive regulation of actin nucleation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
actin filament IEA
Inferred from Electronic Annotation
more info
 
cell cortex IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
cappuccino
Names
CG3399-PA
CG3399-PB
CG3399-PD
CG3399-PE
CG3399-PF
CG3399-PG
CG3399-PH
CG3399-PI
CG3399-PJ
cappucino
capu-PA
capu-PB
capu-PD
capu-PE
capu-PF
capu-PG
capu-PH
capu-PI
capu-PJ

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    3872646..3902860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001144313.2NP_001137785.1  cappuccino, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137785.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z014
    Related
    FBpp0288518, FBtr0290079
    Conserved Domains (1) summary
    smart00498
    Location:459886
    FH2; Formin Homology 2 Domain
  2. NM_164565.2NP_722950.2  cappuccino, isoform J [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722950.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IQ12
    Related
    FBpp0288521, FBtr0290082
    Conserved Domains (1) summary
    smart00498
    Location:6161043
    FH2; Formin Homology 2 Domain
  3. NM_001144311.2NP_001137783.1  cappuccino, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137783.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z010
    Related
    FBpp0288516, FBtr0290077
    Conserved Domains (1) summary
    smart00498
    Location:8071234
    FH2; Formin Homology 2 Domain
  4. NM_001144312.2NP_001137784.1  cappuccino, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137784.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z011
    Related
    FBpp0288517, FBtr0290078
    Conserved Domains (1) summary
    smart00498
    Location:8881315
    FH2; Formin Homology 2 Domain
  5. NM_164566.3NP_722951.1  cappuccino, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722951.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VQV9
    Related
    FBpp0077200, FBtr0077511
    Conserved Domains (1) summary
    smart00498
    Location:7341161
    FH2; Formin Homology 2 Domain
  6. NM_001144314.2NP_001137786.1  cappuccino, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137786.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z012
    Related
    FBpp0288519, FBtr0290080
    Conserved Domains (1) summary
    smart00498
    Location:6341061
    FH2; Formin Homology 2 Domain
  7. NM_001144315.2NP_001137787.1  cappuccino, isoform I [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137787.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z013
    Related
    FBpp0288520, FBtr0290081
    Conserved Domains (1) summary
    smart00498
    Location:8251252
    FH2; Formin Homology 2 Domain
  8. NM_164567.2NP_722952.1  cappuccino, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722952.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8MRP5
    Related
    FBpp0077201, FBtr0077512
    Conserved Domains (1) summary
    smart00498
    Location:5761003
    FH2; Formin Homology 2 Domain
  9. NM_057618.3NP_476966.1  cappuccino, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476966.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q24120
    Related
    FBpp0077202, FBtr0077513
    Conserved Domains (1) summary
    smart00498
    Location:5861013
    FH2; Formin Homology 2 Domain
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