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bowl brother of odd with entrails limited [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33602, updated on 26-Aug-2021

Summary

Official Symbol
bowlprovided by FlyBase
Official Full Name
brother of odd with entrails limitedprovided by FlyBase
Primary source
FLYBASE:FBgn0004893
Locus tag
Dmel_CG10021
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
17-29-5; Bowl; BOWL; CG10021; Dmel\CG10021; l(2)c; org2; Su(tor)2-1
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Genomic context

See bowl in Genome Data Viewer
Location:
24C3-24C4; 2-11 cM
Exon count:
7
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (3771700..3784121)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (3771700..3784121)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene long non-coding RNA:CR43704 Neighboring gene mir-1004 stem loop Neighboring gene uncharacterized protein Neighboring gene pseudo

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in embryo development IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in embryonic foregut morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in embryonic hindgut morphogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in embryonic hindgut morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in embryonic pattern specification IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in embryonic pattern specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in hindgut morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in imaginal disc-derived leg joint morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in imaginal disc-derived leg morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in negative regulation of transcription, DNA-templated ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of transcription, DNA-templated ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in terminal region determination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in wing disc development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
brother of odd with entrails limited
Names
CG10021-PA
CG10021-PB
CG10021-PC
CG10021-PD
CG10021-PF
CG10021-PG
CG10021-PH
bowel
bowl-PA
bowl-PB
bowl-PC
bowl-PD
bowl-PF
bowl-PG
bowl-PH
odd skipped-related 2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    3771700..3784121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_164557.3NP_722940.1  brother of odd with entrails limited, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722940.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VQU9
    UniProtKB/TrEMBL
    A4V047
    Related
    FBpp0077179, FBtr0077490
    Conserved Domains (4) summary
    COG5048
    Location:232372
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:240260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:322344
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:252277
    zf-H2C2_2; Zinc-finger double domain
  2. NM_001258932.2NP_001245861.1  brother of odd with entrails limited, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245861.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VQU9
    UniProtKB/TrEMBL
    A4V047
    Related
    FBpp0297870, FBtr0307027
    Conserved Domains (4) summary
    COG5048
    Location:232372
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:240260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:322344
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:252277
    zf-H2C2_2; Zinc-finger double domain
  3. NM_057535.4NP_476883.1  brother of odd with entrails limited, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476883.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VQU9
    UniProtKB/TrEMBL
    A4V047
    Related
    FBpp0077180, FBtr0077491
    Conserved Domains (4) summary
    COG5048
    Location:232372
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:240260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:322344
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:252277
    zf-H2C2_2; Zinc-finger double domain
  4. NM_001258933.2NP_001245862.1  brother of odd with entrails limited, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245862.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VQU9
    UniProtKB/TrEMBL
    A4V047
    Related
    FBpp0297871, FBtr0307028
    Conserved Domains (4) summary
    COG5048
    Location:232372
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:240260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:322344
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:252277
    zf-H2C2_2; Zinc-finger double domain
  5. NM_001258934.1NP_001245863.1  brother of odd with entrails limited, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245863.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VQU9
    UniProtKB/TrEMBL
    A4V047
    Related
    FBpp0297872, FBtr0307029
    Conserved Domains (4) summary
    COG5048
    Location:232372
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:240260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:322344
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:252277
    zf-H2C2_2; Zinc-finger double domain
  6. NM_164558.2NP_722941.1  brother of odd with entrails limited, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722941.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VQU9
    UniProtKB/TrEMBL
    A4V047
    Related
    FBpp0077181, FBtr0077492
    Conserved Domains (4) summary
    COG5048
    Location:232372
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:240260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:322344
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:252277
    zf-H2C2_2; Zinc-finger double domain
  7. NM_164556.2NP_722939.1  brother of odd with entrails limited, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_722939.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9VQU9
    UniProtKB/TrEMBL
    A4V047
    Related
    FBpp0077182, FBtr0077493
    Conserved Domains (4) summary
    COG5048
    Location:232372
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:240260
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:322344
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:252277
    zf-H2C2_2; Zinc-finger double domain
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