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man1a2 mannosidase, alpha, class 1A, member 2 [ Danio rerio (zebrafish) ]

Gene ID: 335538, updated on 1-Aug-2018

Summary

Official Symbol
man1a2provided by ZNC
Official Full Name
mannosidase, alpha, class 1A, member 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-070912-390
See related
Ensembl:ENSDARG00000041728 Vega:OTTDARG00000025603
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
fj20e02; wu:fj20e02; si:dkey-174k18.8
Orthologs

Genomic context

See man1a2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
14
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (20554169..20765330)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (20743282..20954456)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene V-set domain containing T cell activation inhibitor 1 Neighboring gene tripartite motif containing 45 Neighboring gene uncharacterized LOC103911637 Neighboring gene terminal nucleotidyltransferase 5C Neighboring gene ganglioside induced differentiation associated protein 2

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity IEA
Inferred from Electronic Annotation
more info
 
hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
 
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
N-glycan processing IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
mannosyl-oligosaccharide 1,2-alpha-mannosidase IB
NP_001243551.1
XP_005167594.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001256622.1NP_001243551.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB

    See identical proteins and their annotated locations for NP_001243551.1

    Status: VALIDATED

    Source sequence(s)
    CR391919, CT573229
    UniProtKB/TrEMBL
    B0V2X9
    Related
    ENSDARP00000151347.1, ENSDART00000183911.1
    Conserved Domains (1) summary
    pfam01532
    Location:191630
    Glyco_hydro_47; Glycosyl hydrolase family 47

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    20554169..20765330
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005167537.4XP_005167594.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IB isoform X1

    See identical proteins and their annotated locations for XP_005167594.1

    UniProtKB/TrEMBL
    B0V2X9
    Related
    ENSDARP00000120629.1, OTTDARP00000027272, ENSDART00000144248.2
    Conserved Domains (1) summary
    pfam01532
    Location:191630
    Glyco_hydro_47; Glycosyl hydrolase family 47
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