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Rab21 Rab21 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 3355163, updated on 5-Jul-2025
Official Symbol
Rab21provided by FlyBase
Official Full Name
Rab21provided by FlyBase
Primary source
FLYBASE:FBgn0039966
Locus tag
Dmel_CG17515
See related
AllianceGenome:FB:FBgn0039966
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
AAF45341; anon-EST:Posey237; CG17515; CG40304; Dmel\CG17515; DmRab21; Q7PLE8; Rab-21; rab21
Summary
Enables phosphatidylinositol 3-kinase catalytic subunit binding activity. Involved in cortical actin cytoskeleton organization and positive regulation of autophagosome maturation. Located in early endosome. Is expressed in several structures, including Bolwig organ; adult ensheathing glial cell; brain; imaginal disc; and synaptic neuropil domain. Orthologous to human RAB21 (RAB21, member RAS oncogene family). [provided by Alliance of Genome Resources, Jul 2025]
Orthologs
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See Rab21 in Genome Data Viewer
Location:
20F3-20F3; 1-66 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (23012140..23013409, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (22413976..22415245, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene antisense RNA:CR45009 Neighboring gene long non-coding RNA:CR45010 Neighboring gene alpha1,3-fucosyltransferase C Neighboring gene Cytochrome c oxidase assembly factor 7 Neighboring gene zydeco

Products Interactant Other Gene Complex Source Pubs Description
  • Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables phosphatidylinositol 3-kinase catalytic subunit binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in Rab protein signal transduction IEA
Inferred from Electronic Annotation
more info
 
involved_in Rab protein signal transduction ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cortical actin cytoskeleton organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in intracellular protein transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in positive regulation of autophagosome maturation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vesicle-mediated transport ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in early endosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in early endosome IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in recycling endosome HDA PubMed 
located_in synapse HDA PubMed 
located_in vesicle ISS
Inferred from Sequence or Structural Similarity
more info
 
Preferred Names
Rab21
Names
CG17515-PA
CG17515-PC
CG17515-PD
Rab21-PA
Rab21-PC
Rab21-PD

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    23012140..23013409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001272856.1NP_001259785.1  Rab21, isoform D

    See identical proteins and their annotated locations for NP_001259785.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7PLE9, Q8MRG8
    Conserved Domains (2) summary
    cd04123
    Location:14176
    Rab21; Rab GTPase family 21 (Rab21)
    pfam00071
    Location:15177
    Ras; Ras family
  2. NM_001042856.3NP_001036321.2  Rab21, isoform C

    See identical proteins and their annotated locations for NP_001036321.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7PLE9, Q8MRG8
    Conserved Domains (2) summary
    cd04123
    Location:14176
    Rab21; Rab GTPase family 21 (Rab21)
    pfam00071
    Location:15177
    Ras; Ras family
  3. NM_001042857.1NP_001036322.1  Rab21, isoform A

    See identical proteins and their annotated locations for NP_001036322.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7PLE8, Q8MRG8
    Conserved Domains (2) summary
    pfam00071
    Location:1144
    Ras; Ras family
    cl21455
    Location:1143
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases