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ube2g1a ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast) [ Danio rerio (zebrafish) ]

Gene ID: 334133, updated on 27-Mar-2024

Summary

Official Symbol
ube2g1aprovided by ZNC
Official Full Name
ubiquitin-conjugating enzyme E2G 1a (UBC7 homolog, yeast)provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-6065
See related
Ensembl:ENSDARG00000015292 AllianceGenome:ZFIN:ZDB-GENE-030131-6065
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
ube2g1; ube2g2; zgc:55974; wu:fi33c04
Summary
Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Orthologous to human UBE2G1 (ubiquitin conjugating enzyme E2 G1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 5
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (30986512..30995108)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (30386359..30394955)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene SPNS lysolipid transporter 2, sphingosine-1-phosphate Neighboring gene SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative) Neighboring gene ankyrin repeat and FYVE domain containing 1 Neighboring gene cytochrome b5 domain containing 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
enables ubiquitin conjugating enzyme activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein polyubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
ubiquitin-conjugating enzyme E2 G1a
Names
ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans)
ubiquitin-conjugating enzyme E2G 2
NP_956157.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199863.1NP_956157.1  ubiquitin-conjugating enzyme E2 G1a

    See identical proteins and their annotated locations for NP_956157.1

    Status: PROVISIONAL

    Source sequence(s)
    BC045512
    UniProtKB/TrEMBL
    A0A8M1PEP1, Q7ZVK2
    Related
    ENSDARP00000016596.5, ENSDART00000005893.7
    Conserved Domains (1) summary
    pfam00179
    Location:10161
    UQ_con; Ubiquitin-conjugating enzyme

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    30986512..30995108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394583.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    267981..276577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)