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Wt1os WT1 transcription factor, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 329480, updated on 12-Apr-2023

Summary

Official Symbol
Wt1osprovided by MGI
Official Full Name
WT1 transcription factor, opposite strandprovided by MGI
Primary source
MGI:MGI:2138884
See related
Ensembl:ENSMUSG00000074987 AllianceGenome:MGI:2138884
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Wt1-as; 6030498F17
Summary
Orthologous to human WT1-AS (WT1 antisense RNA). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in ovary adult (RPKM 1.6), subcutaneous fat pad adult (RPKM 0.8) and 5 other tissues See more
Orthologs
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Genomic context

See Wt1os in Genome Data Viewer
Location:
2; 2 E2- E3
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_04 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (104906883..104956855, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (105076538..105126510, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 38521 Neighboring gene NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1 pseudogene Neighboring gene Wt1 promoter region Neighboring gene WT1 transcription factor Neighboring gene thioesterase superfamily member 7

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Other Names

  • WT1 antisense RNA
  • Wilms tumor 1 homolog, opposite strand

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_015462.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK031729, AK032905, AK165089
    Related
    ENSMUST00000172701.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    104906883..104956855 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)