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Ankrd44 ankyrin repeat domain 44 [ Mus musculus (house mouse) ]

Gene ID: 329154, updated on 5-Mar-2024

Summary

Official Symbol
Ankrd44provided by MGI
Official Full Name
ankyrin repeat domain 44provided by MGI
Primary source
MGI:MGI:3045243
See related
Ensembl:ENSMUSG00000052331 AllianceGenome:MGI:3045243
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
PP6-ARS-B; A130096K20; 4930444A19Rik; E130014H08Rik
Summary
Orthologous to human ANKRD44 (ankyrin repeat domain 44). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in thymus adult (RPKM 10.4), lung adult (RPKM 10.2) and 24 other tissues See more
Orthologs
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Genomic context

Location:
1 C1.2; 1 27.7 cM
Exon count:
30
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (54684499..54968142, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (54645340..54928983, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene post-GPI attachment to proteins 1 Neighboring gene predicted gene, 51623 Neighboring gene STARR-seq mESC enhancer starr_00937 Neighboring gene predicted gene, 19637 Neighboring gene RIKEN cDNA 4930444A19 gene Neighboring gene STARR-seq mESC enhancer starr_00938 Neighboring gene STARR-positive B cell enhancer ABC_E4315 Neighboring gene STARR-positive B cell enhancer mm9_chr1:54898672-54898972 Neighboring gene STARR-seq mESC enhancer starr_00940 Neighboring gene STARR-positive B cell enhancer ABC_E11069 Neighboring gene CapStarr-seq enhancer MGSCv37_chr1:54970246-54970399 Neighboring gene STARR-positive B cell enhancer ABC_E11070 Neighboring gene STARR-seq mESC enhancer starr_00941 Neighboring gene STARR-seq mESC enhancer starr_00942 Neighboring gene STARR-seq mESC enhancer starr_00943 Neighboring gene splicing factor 3b, subunit 1 Neighboring gene ribosomal protein S2 pseudogene Neighboring gene coenzyme Q10B

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B
Names
ankyrin repeat domain-containing protein 44
serine/threonine-protein phosphatase 6 regulatory subunit ARS-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001081433.3NP_001074902.2  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B

    See identical proteins and their annotated locations for NP_001074902.2

    Status: VALIDATED

    Source sequence(s)
    AC151572, AC160472, AC166111, BF461794
    Consensus CDS
    CCDS35566.2
    UniProtKB/Swiss-Prot
    B2RXN6, B2RXR6, B7ZWK8
    Related
    ENSMUSP00000137616.2, ENSMUST00000179030.8
    Conserved Domains (6) summary
    cd00204
    Location:134259
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam00023
    Location:272304
    Ank; Ankyrin repeat
    pfam12796
    Location:177269
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:672723
    Ank_4; Ankyrin repeats (many copies)
    pfam13857
    Location:722779
    Ank_5; Ankyrin repeats (many copies)
    sd00045
    Location:140170
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    54684499..54968142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030254997.1XP_030110857.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X9

    Related
    ENSMUSP00000136802.2, ENSMUST00000178226.3
    Conserved Domains (2) summary
    PHA03095
    Location:14287
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:6898
    ANK; ANK repeat [structural motif]
  2. XM_030254994.1XP_030110854.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X6

    Conserved Domains (2) summary
    PHA03095
    Location:14287
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:6898
    ANK; ANK repeat [structural motif]
  3. XM_006496071.4XP_006496134.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X2

    Conserved Domains (3) summary
    PHA03095
    Location:86359
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:140170
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:12104
    Ank_2; Ankyrin repeats (3 copies)
  4. XM_006496073.4XP_006496136.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X5

    UniProtKB/TrEMBL
    E9QNQ2
    Related
    ENSMUSP00000040327.10, ENSMUST00000044359.16
    Conserved Domains (3) summary
    PHA03095
    Location:86359
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:140170
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:12104
    Ank_2; Ankyrin repeats (3 copies)
  5. XM_006496070.4XP_006496133.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X1

    Conserved Domains (3) summary
    PHA03095
    Location:86359
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:140170
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:12104
    Ank_2; Ankyrin repeats (3 copies)
  6. XM_030254996.1XP_030110856.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X7

    Conserved Domains (2) summary
    PHA03095
    Location:14287
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:6898
    ANK; ANK repeat [structural motif]
  7. XM_036165753.1XP_036021646.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X8

    Conserved Domains (3) summary
    PHA03095
    Location:61334
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:115145
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:279
    Ank_2; Ankyrin repeats (3 copies)
  8. XM_030254992.1XP_030110852.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X4

    Conserved Domains (3) summary
    PHA03095
    Location:61334
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:115145
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:279
    Ank_2; Ankyrin repeats (3 copies)
  9. XM_011238538.3XP_011236840.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X3

    Conserved Domains (3) summary
    PHA03095
    Location:61334
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:115145
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:279
    Ank_2; Ankyrin repeats (3 copies)
  10. XM_030254995.2XP_030110855.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X6

    Conserved Domains (2) summary
    PHA03095
    Location:14287
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:6898
    ANK; ANK repeat [structural motif]
  11. XM_030254991.2XP_030110851.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B isoform X3

    Conserved Domains (3) summary
    PHA03095
    Location:61334
    PHA03095; ankyrin-like protein; Provisional
    sd00045
    Location:115145
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:279
    Ank_2; Ankyrin repeats (3 copies)