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Zfp532 zinc finger protein 532 [ Mus musculus (house mouse) ]

Gene ID: 328977, updated on 26-Sep-2022

Summary

Official Symbol
Zfp532provided by MGI
Official Full Name
zinc finger protein 532provided by MGI
Primary source
MGI:MGI:3036282
See related
Ensembl:ENSMUSG00000042439 AllianceGenome:MGI:3036282
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Znf532; mKIAA1629; C530030I18Rik
Summary
Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be located in nucleus. Is expressed in female reproductive system and urinary system. Orthologous to human ZNF532 (zinc finger protein 532). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in CNS E14 (RPKM 12.0), whole brain E14.5 (RPKM 12.0) and 22 other tissues See more
Orthologs
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Genomic context

See Zfp532 in Genome Data Viewer
Location:
18; 18 E1
Exon count:
13
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 18 NC_000084.7 (65713301..65822514)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 18 NC_000084.6 (65580230..65689443)

Chromosome 18 - NC_000084.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118568360 Neighboring gene predicted gene, 41759 Neighboring gene zinc finger protein 592 pseudogene Neighboring gene O-acyltransferase like Neighboring gene predicted gene, 54022

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001361051.1NP_001347980.1  zinc finger protein 532 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC124578, AC132307
    Consensus CDS
    CCDS89265.1
    UniProtKB/TrEMBL
    S4R2I9
    Conserved Domains (3) summary
    sd00017
    Location:10241044
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:12021230
    zf-C2H2_11; zinc-finger C2H2-type
    cl25756
    Location:150360
    BASP1; Brain acid soluble protein 1 (BASP1 protein)
  2. NM_001361052.1NP_001347981.1  zinc finger protein 532 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC124578, AC132307
    Consensus CDS
    CCDS89265.1
    UniProtKB/TrEMBL
    S4R2I9
    Conserved Domains (3) summary
    sd00017
    Location:10241044
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:12021230
    zf-C2H2_11; zinc-finger C2H2-type
    cl25756
    Location:150360
    BASP1; Brain acid soluble protein 1 (BASP1 protein)
  3. NM_001361053.1NP_001347982.1  zinc finger protein 532 isoform 1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2 and 3 encode the same protein.
    Source sequence(s)
    AC124578, AC132307
    Consensus CDS
    CCDS89265.1
    UniProtKB/TrEMBL
    S4R2I9
    Related
    ENSMUSP00000157481.2, ENSMUST00000237553.2
    Conserved Domains (3) summary
    sd00017
    Location:10241044
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam16622
    Location:12021230
    zf-C2H2_11; zinc-finger C2H2-type
    cl25756
    Location:150360
    BASP1; Brain acid soluble protein 1 (BASP1 protein)
  4. NM_207255.2NP_997138.1  zinc finger protein 532 isoform 2

    See identical proteins and their annotated locations for NP_997138.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR and has multiple coding region differences, compared to variant 1. The encoded protein (isoform 2) is shorter than isoform 1.
    Source sequence(s)
    AA253972, AK163498, AK163988, BC067032
    Consensus CDS
    CCDS29307.1
    UniProtKB/Swiss-Prot
    Q6NXK2, Q6ZPL1
    UniProtKB/TrEMBL
    Q3TQ12
    Related
    ENSMUSP00000036582.5, ENSMUST00000049016.12
    Conserved Domains (3) summary
    sd00017
    Location:753772
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13912
    Location:9991021
    zf-C2H2_6; C2H2-type zinc finger
    pfam16622
    Location:934962
    zf-C2H2_11; zinc-finger C2H2-type

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000084.7 Reference GRCm39 C57BL/6J

    Range
    65713301..65822514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)