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Gfod1 glucose-fructose oxidoreductase domain containing 1 [ Mus musculus (house mouse) ]

Gene ID: 328232, updated on 26-Sep-2022

Summary

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Official Symbol
Gfod1provided by MGI
Official Full Name
glucose-fructose oxidoreductase domain containing 1provided by MGI
Primary source
MGI:MGI:2145304
See related
Ensembl:ENSMUSG00000051335 AllianceGenome:MGI:2145304
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
9630032O13
Summary
Predicted to enable oxidoreductase activity. Predicted to be located in extracellular region. Is expressed in several structures, including alimentary system; brain; genitourinary system; immune system; and integumental system. Orthologous to human GFOD1 (glucose-fructose oxidoreductase domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in cerebellum adult (RPKM 4.0), lung adult (RPKM 3.3) and 24 other tissues See more
Orthologs
human all
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Genomic context

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See Gfod1 in Genome Data Viewer
Location:
13; 13 A4
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (43348716..43457648, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (43195240..43304172, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene TBC1 domain family, member 7 Neighboring gene predicted gene, 40929 Neighboring gene predicted gene, 53215 Neighboring gene predicted gene, 52047 Neighboring gene predicted gene, 53796

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Koscielny G, et al. Nucleic Acids Res, 2014 Jan. PMID 24194600, Free PMC Article
  2. BraInMap Elucidates the Macromolecular Connectivity Landscape of Mammalian Brain. Pourhaghighi R, et al. Cell Syst, 2020 Apr 22. PMID 32325033, Free PMC Article
  3. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  4. Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Zambrowicz BP, et al. Proc Natl Acad Sci U S A, 2003 Nov 25. PMID 14610273, Free PMC Article
  5. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

See all (13) citations in PubMed

See citations in PubMed for homologs of this gene provided by HomoloGene

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (2) 

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
glucose-fructose oxidoreductase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001033399.4 → NP_001028571.1  glucose-fructose oxidoreductase domain-containing protein 1 precursor

    See identical proteins and their annotated locations for NP_001028571.1

    Status: PROVISIONAL

    Source sequence(s)
    AC140415
    Consensus CDS
    CCDS26477.1
    UniProtKB/Swiss-Prot
    B9EI39, Q3UHD2
    UniProtKB/TrEMBL
    A0A6P5QR23, A0A8C6GFR4
    Related
    ENSMUSP00000062662.6, ENSMUST00000055341.7
    Conserved Domains (1) summary
    COG0673
    Location:5 → 363
    MviM; Predicted dehydrogenase [General function prediction only]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    43348716..43457648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006516932.4 → XP_006516995.1  glucose-fructose oxidoreductase domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006516995.1

    Conserved Domains (1) summary
    cl40708
    Location:19 → 260
    MviM; Predicted dehydrogenase [General function prediction only]
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3UHD2.1 GenPept UniProtKB/Swiss-Prot:Q3UHD2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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