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CG8142 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32763, updated on 27-Feb-2020

Summary

Official Symbol
CG8142provided by FlyBase
Primary source
FLYBASE:FBgn0030871
Locus tag
Dmel_CG8142
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG8142; DmRFC2; RfC; RFC2; Rfc37

Genomic context

See CG8142 in Genome Data Viewer
Location:
16E1-16E1; 1-59 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (17843343..17844704, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (17737376..17738737, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Suppressor of Cytokine Signaling at 16D Neighboring gene long non-coding RNA:CR44691 Neighboring gene uncharacterized protein Neighboring gene enhancer of yellow 1 Neighboring gene Ucp4A Neighboring gene uncharacterized protein Neighboring gene Spt7 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the CG8142 gene: The CG8142 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, mosquito, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
contributes_to DNA clamp loader activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
DNA repair IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
DNA-dependent DNA replication IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
DNA replication factor C complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Elg1 RFC-like complex IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
uncharacterized protein
Names
CG8142-PA

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    17843343..17844704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_133017.4NP_573245.1  uncharacterized protein Dmel_CG8142 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_573245.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VX15
    Related
    FBpp0074246, FBtr0074472
    Conserved Domains (4) summary
    cd00009
    Location:45187
    AAA; The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, ...
    PRK00440
    Location:31344
    rfc; replication factor C small subunit; Reviewed
    pfam08542
    Location:293344
    Rep_fac_C; Replication factor C C-terminal domain
    pfam16193
    Location:211256
    AAA_assoc_2; AAA C-terminal domain
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