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SETP2 SET pseudogene 2 [ Homo sapiens (human) ]

Gene ID: 326277, updated on 4-Mar-2025

Summary

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Official Symbol
SETP2provided by HGNC
Official Full Name
SET pseudogene 2provided by HGNC
Primary source
HGNC:HGNC:20032
See related
AllianceGenome:HGNC:20032
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See SETP2 in Genome Data Viewer
Location:
14q22.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (51436150..51439313)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (45642951..45646115)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (51902868..51906031)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370495 Neighboring gene long intergenic non-protein coding RNA 640 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:51835486-51836070 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:51861840-51862340 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr14:51862502-51863701 Neighboring gene long intergenic non-protein coding RNA 2310 Neighboring gene FERM domain containing 6 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:51934347-51935061 Neighboring gene FRMD6 antisense RNA 2 Neighboring gene RNA, U6 small nuclear 1291, pseudogene Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:52000910-52002109 Neighboring gene uncharacterized LOC124903415

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Other Names

  • SET nuclear oncogene pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_002537.6 

    Range
    101..3264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    51436150..51439313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    45642951..45646115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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