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hhip hedgehog interacting protein [ Danio rerio (zebrafish) ]

Gene ID: 326102, updated on 16-Oct-2021

Summary

Official Symbol
hhipprovided by ZNC
Official Full Name
hedgehog interacting proteinprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-4827
See related
Ensembl:ENSDARG00000060397
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fd99f01; wu:fc52e12; wu:fd99f01; zgc:153478
Orthologs
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Genomic context

See hhip in Genome Data Viewer
Location:
chromosome: 1
Exon count:
13
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (35790082..35835863)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (35058055..35103836)
103 previous assembly Zv9 (GCF_000002035.4) 1 NC_007112.5 (35498197..35543978)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene Fras1 related extracellular matrix 3 Neighboring gene si:dkey-27h10.2 Neighboring gene nephronectin-like Neighboring gene SMAD family member 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Homology

Clone Names

  • MGC153478

General protein information

Preferred Names
hedgehog-interacting protein
Names
Hip
uki
ukkie

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001080012.1NP_001073481.1  hedgehog-interacting protein precursor

    See identical proteins and their annotated locations for NP_001073481.1

    Status: PROVISIONAL

    Source sequence(s)
    BC128659
    UniProtKB/TrEMBL
    A1A5I0
    Related
    ENSDARP00000079486.4, ENSDART00000085051.5
    Conserved Domains (2) summary
    pfam03024
    Location:36212
    Folate_rec; Folate receptor family
    pfam07995
    Location:218420
    GSDH; Glucose / Sorbosone dehydrogenase

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    35790082..35835863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394497.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    218219..263860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395221.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    203708..249215
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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