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CNI02490 expressed protein [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3259479, updated on 23-Oct-2023

Summary

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Gene symbol
CNI02490
Gene description
expressed protein
Locus tag
CNI02490
Gene type
protein coding
RNA name
expressed protein
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 9
Exon count:
6
Sequence:
Chromosome: 9; NC_006694.1 (678211..680616, complement)

Chromosome 9 - NC_006694.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene t-complex protein 1, zeta subunit (tcp-1-zeta), putative Neighboring gene hypothetical protein Neighboring gene ER to Golgi transport-related protein, putative Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006694.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Y-form DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-strand/single-strand DNA junction binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flap-structured DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA double-strand break processing involved in repair via single-strand annealing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
expressed protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006694.1 Reference assembly

    Range
    678211..680616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024657835.1 → XP_024513486.1  expressed protein [Cryptococcus neoformans var. neoformans JEC21]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5KBH7
    Conserved Domains (2) summary
    pfam08573
    Location:547 → 632
    SAE2; DNA repair protein endonuclease SAE2/CtIP C-terminus
    cl25732
    Location:47 → 161
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
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