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CNH02560 syntaxin, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3259003, updated on 31-Jan-2024

Summary

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Gene symbol
CNH02560
Gene description
syntaxin, putative
Locus tag
CNH02560
Gene type
protein coding
RNA name
syntaxin, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 8
Exon count:
7
Sequence:
Chromosome: 8; NC_006693.1 (401330..403292, complement)

Chromosome 8 - NC_006693.1Genomic Context describing neighboring genes Neighboring gene phosphoethanolamine N-methyltransferase, putative Neighboring gene ABC transporter, putative Neighboring gene hypothetical protein Neighboring gene cellular morphogenesis-related protein, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006693.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006693.1 Reference assembly

    Range
    401330..403292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_572432.1 → XP_572432.1  syntaxin, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_572432.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q55IS3, Q5KCX6
    Conserved Domains (3) summary
    cd15849
    Location:252 → 315
    SNARE_Sso1; SNARE motif of Sso1
    pfam00804
    Location:102 → 286
    Syntaxin; Syntaxin
    cl00143
    Location:102 → 237
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
Nucleotide Protein
Heading Accession and Version

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