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CNF00780 cleavage and polyadenylation specific protein, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3258187, updated on 11-Apr-2024

Summary

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Gene symbol
CNF00780
Gene description
cleavage and polyadenylation specific protein, putative
Locus tag
CNF00780
Gene type
protein coding
RNA name
cleavage and polyadenylation specific protein, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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Genomic context

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Location:
chromosome: 6
Exon count:
18
Sequence:
Chromosome: 6; NC_006691.1 (244324..249742)

Chromosome 6 - NC_006691.1Genomic Context describing neighboring genes Neighboring gene expressed protein Neighboring gene expressed protein Neighboring gene hypothetical protein Neighboring gene motor, putative Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006691.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mRNA cleavage and polyadenylation specificity factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cleavage and polyadenylation specific protein, putative

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006691.1 Reference assembly

    Range
    244324..249742
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_571490.2 → XP_571490.1  cleavage and polyadenylation specific protein, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_571490.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CM62, P0CM63, Q55QF1, Q5KFS0
    UniProtKB/TrEMBL
    A0A854QGZ9
    Conserved Domains (3) summary
    COG5161
    Location:1 → 1427
    SFT1; Pre-mRNA cleavage and polyadenylation specificity factor [RNA processing and modification]
    pfam03178
    Location:1066 → 1398
    CPSF_A; CPSF A subunit region
    pfam10433
    Location:143 → 671
    MMS1_N; Mono-functional DNA-alkylating methyl methanesulfonate N-term
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CM62.1

Gene LinkOut

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Molecular Biology Databases