U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CNE01310 spliceosome complex protein, putative [ Cryptococcus neoformans var. neoformans JEC21 ]

Gene ID: 3257860, updated on 23-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
CNE01310
Gene description
spliceosome complex protein, putative
Locus tag
CNE01310
Gene type
protein coding
RNA name
spliceosome complex protein, putative
RefSeq status
PROVISIONAL
Organism
Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_006687.1 (359441..362816, complement)

Chromosome 5 - NC_006687.1Genomic Context describing neighboring genes Neighboring gene tRNA-Ala Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene expressed protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_006687.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in generation of catalytic spliceosome for first transesterification step IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U2-type catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
spliceosome complex protein, putative

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006687.1 Reference assembly

    Range
    359441..362816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_570716.1 → XP_570716.1  spliceosome complex protein, putative [Cryptococcus neoformans var. neoformans JEC21]

    See identical proteins and their annotated locations for XP_570716.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P0CO08, P0CO09, Q55SQ9, Q5KH46
    UniProtKB/TrEMBL
    A0A854QCT9
    Conserved Domains (3) summary
    smart00386
    Location:773 → 807
    HAT; HAT (Half-A-TPR) repeats
    COG3063
    Location:697 → 844
    PilF; Tfp pilus assembly protein PilF [Cell motility, Extracellular structures]
    sd00006
    Location:634 → 670
    TPR; TPR repeat [structural motif]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CO08.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases