U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TK_RS02880 DNA polymerase sliding clamp [ Thermococcus kodakarensis KOD1 ]

Gene ID: 3235115, updated on 27-Nov-2025
Gene symbol
TK_RS02880
Gene description
DNA polymerase sliding clamp
Locus tag
TK_RS02880
Gene type
protein coding
Organism
Thermococcus kodakarensis KOD1 (strain: KOD1, type-material: type strain of Thermococcus kodakarensis)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus
Old locus tag
TK0582
Try the new Gene page
Try the new Transcripts and proteins table
Sequence:
NC_006624.1 (501665..502426, complement)

NC_006624.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene DprA-like winged helix domain-containing protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic Sequence:
NC_006624.1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Comparative analyses of the two proliferating cell nuclear antigens from the hyperthermophilic archaeon, Thermococcus kodakarensis. Kuba Y, et al. Genes Cells, 2012 Nov. PMID 23078585
  2. Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes. Fukui T, et al. Genome Res, 2005 Mar. PMID 15710748, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PCNA1 (TK0582) stimulated the DNA synthesis reactions of the two DNA polymerases, PolB and PolD, from T. kodakarensis in vitro, PCNA2, however, only had an effect on PolB.
    Title: Comparative analyses of the two proliferating cell nuclear antigens from the hyperthermophilic archaeon, Thermococcus kodakarensis.
Submit: New GeneRIF Correction
Preferred Names
DNA polymerase sliding clamp

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006624.1 Reference assembly

    Range
    501665..502426 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_011249537.1 DNA polymerase sliding clamp

    See identical proteins and their annotated locations for WP_011249537.1

    UniProtKB/Swiss-Prot
    Q5JFD3
    Conserved Domains (2) summary
    PRK01115
    Location:3 → 249
    PRK01115; DNA polymerase sliding clamp; Validated
    cd00577
    Location:5 → 249
    PCNA; Proliferating Cell Nuclear Antigen (PCNA) domain found in eukaryotes and archaea. These polymerase processivity factors play a role in DNA replication and repair. PCNA encircles duplex DNA in its central cavity, providing a DNA-bound platform for the ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5JFD3.1