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pkn3 protein kinase N3 [ Danio rerio (zebrafish) ]

Gene ID: 323182, updated on 22-Nov-2020

Summary

Official Symbol
pkn3provided by ZNC
Official Full Name
protein kinase N3provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-1902
See related
Ensembl:ENSDARG00000079585
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
prk; prkcl2; wu:fb92a0; wu:fb92a02; si:dkey-202g15.3
Orthologs

Genomic context

See pkn3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
23
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (31828887..31857389, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (31229173..31257233, complement)
103 previous assembly Zv9 (GCF_000002035.4) 5 NC_007116.5 (33466935..33495063, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene UDP-N-acetylglucosamine pyrophosphorylase 1, like 1 Neighboring gene zinc finger DHHC-type palmitoyltransferase 12b Neighboring gene iron-sulfur cluster assembly enzyme b Neighboring gene transmembrane protein 119b

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
ATP binding IEA
Inferred from Electronic Annotation
more info
 
calcium-dependent protein kinase C activity IEA
Inferred from Electronic Annotation
more info
 
kinase activity IEA
Inferred from Electronic Annotation
more info
 
nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
protein kinase C activity IEA
Inferred from Electronic Annotation
more info
 
protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 
small GTPase binding IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
peptidyl-serine phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cleavage furrow IEA
Inferred from Electronic Annotation
more info
 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
membrane IEA
Inferred from Electronic Annotation
more info
 
midbody IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein kinase N3; serine/threonine-protein kinase N2
Names
protein kinase C-like 2
XP_003198687.2
XP_005172016.2
XP_021332178.1
XP_021332179.1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    31828887..31857389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021476503.1XP_021332178.1  serine/threonine-protein kinase N2 isoform X1

    Related
    ENSDARP00000103609.3, ENSDART00000112546.4
    Conserved Domains (5) summary
    cd08687
    Location:379462
    C2_PKN-like; C2 domain in Protein kinase C-like (PKN) proteins
    cd11622
    Location:2590
    HR1_PKN_1; First Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N
    cd11637
    Location:199271
    HR1_PKN3_3; Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N3
    cd05589
    Location:614938
    STKc_PKN; Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N
    cl00087
    Location:111183
    HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases
  2. XM_021476504.1XP_021332179.1  serine/threonine-protein kinase N2 isoform X2

    Conserved Domains (4) summary
    cd08687
    Location:264347
    C2_PKN-like; C2 domain in Protein kinase C-like (PKN) proteins
    cd11637
    Location:84156
    HR1_PKN3_3; Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N3
    cd05589
    Location:499823
    STKc_PKN; Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N
    cl00087
    Location:3768
    HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394585.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    143373..171255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003198639.5XP_003198687.2  serine/threonine-protein kinase N2 isoform X1

    Conserved Domains (5) summary
    cd08687
    Location:379462
    C2_PKN-like; C2 domain in Protein kinase C-like (PKN) proteins
    cd11622
    Location:2590
    HR1_PKN_1; First Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N
    cd11637
    Location:199271
    HR1_PKN3_3; Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N3
    cd05589
    Location:614938
    STKc_PKN; Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N
    cl00087
    Location:111183
    HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases
  2. XM_005171959.4XP_005172016.2  serine/threonine-protein kinase N2 isoform X2

    Conserved Domains (4) summary
    cd08687
    Location:264347
    C2_PKN-like; C2 domain in Protein kinase C-like (PKN) proteins
    cd11637
    Location:84156
    HR1_PKN3_3; Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N3
    cd05589
    Location:499823
    STKc_PKN; Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N
    cl00087
    Location:3768
    HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases
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