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CG1640 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32292, updated on 5-Nov-2017
Official Symbol
CG1640provided by FlyBase
Primary source
FLYBASE:FBgn0030478
Locus tag
Dmel_CG1640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
ALT; cg1640; Dmel\CG1640
Location:
11F1-11F1
Exon count:
9
Annotation release Status Assembly Chr Location
Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (13370606..13380160)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (13264639..13274193)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Synaptotagmin 12 Neighboring gene doublesex-Mab related 11E Neighboring gene CG1987 gene product from transcript CG1987-RC Neighboring gene CG1660 gene product from transcript CG1660-RA

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytosol IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
CG1640 gene product from transcript CG1640-RB
Names
CG1640
CG1640-PA
CG1640-PB
CG1640-PC
CG1640-PD
CG1640-PE
CG1640-PF
CG1640-PG
alanine aminotransferase

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    13370606..13380160
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_167365.1NP_727696.2  CG1640, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727696.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VYD9
    Related
    FBpp0073600.1, FBtr0073769
    Conserved Domains (2) summary
    cd00609
    Location:178564
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:99575
    PTZ00377; alanine aminotransferase; Provisional
  2. NM_167369.2NP_727700.1  CG1640, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727700.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KV27
    Related
    FBpp0073605.1, FBtr0073774
    Conserved Domains (2) summary
    cd00609
    Location:171557
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:92568
    PTZ00377; alanine aminotransferase; Provisional
  3. NM_132651.3NP_572879.2  CG1640, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572879.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KV27
    Related
    FBpp0073604.1, FBtr0073773
    Conserved Domains (2) summary
    cd00609
    Location:171557
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:92568
    PTZ00377; alanine aminotransferase; Provisional
  4. NM_167366.2NP_727697.1  CG1640, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727697.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KV27
    Related
    FBpp0073601.1, FBtr0073770
    Conserved Domains (2) summary
    cd00609
    Location:171557
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:92568
    PTZ00377; alanine aminotransferase; Provisional
  5. NM_167367.2NP_727698.1  CG1640, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727698.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KV27
    Related
    FBpp0073602.1, FBtr0073771
    Conserved Domains (2) summary
    cd00609
    Location:171557
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:92568
    PTZ00377; alanine aminotransferase; Provisional
  6. NM_167368.2NP_727699.1  CG1640, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727699.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KV27
    Related
    FBpp0073603.1, FBtr0073772
    Conserved Domains (2) summary
    cd00609
    Location:171557
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:92568
    PTZ00377; alanine aminotransferase; Provisional
  7. NM_001298277.1NP_001285206.1  CG1640, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285206.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q7KV27
    Related
    FBpp0308869.1, FBtr0339837
    Conserved Domains (2) summary
    cd00609
    Location:171557
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PTZ00377
    Location:92568
    PTZ00377; alanine aminotransferase; Provisional
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