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deoD PROBABLE PURINE NUCLEOSIDE PHOSPHORYLASE DEOD (INOSINE PHOSPHORYLASE) (PNP) [ Mycobacterium bovis AF2122/97 ]

Gene ID: 32287645, discontinued on 3-Jun-2021
  • This record was discontinued.
Gene symbol
deoD
Gene description
PROBABLE PURINE NUCLEOSIDE PHOSPHORYLASE DEOD (INOSINE PHOSPHORYLASE) (PNP)
Locus tag
BQ2027_MB3335
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium bovis AF2122/97 (isolate: AF2122/97)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Location:
chromosome: Mycobacterium_bovis_AF2122/97
Sequence:
Chromosome: Mycobacterium_bovis_AF212297; NC_002945.4 (3652989..3653795)
Genomic Sequence:
NC_002945.4

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Names
PROBABLE PURINE NUCLEOSIDE PHOSPHORYLASE DEOD (INOSINE PHOSPHORYLASE) (PNP)
YP_009360696.1
  • Mb3335, deoD, len: 268 aa. Equivalent to Rv3307, len: 268 aa, from Mycobacterium tuberculosis strain H37Rv, (100.0% identity in 268 aa overlap). Probable deoD (alternate gene name: punA), purine nucleoside phosphorylase (EC 2.4.2.1), similar to others especially P46862|PUNA_MYCLE|DEOD_MYCLE|ML0707|L308_F2_56 from M. leprae (268 aa), FASTA scores: opt: 1373, E(): 1.5e-74, (82.05% identity in 262 aa overlap); Q9EWV2|2SCK31.24 from Streptomyces coelicolor (274 aa), FASTA scores: opt: 1026, E(): 6.4e-54, (60.5% identity in 266 aa overlap); P81989|PUNA_CELSP from Cellulomonas sp (282 aa), FASTA scores: opt: 963, E(): 3.6e-50, (58.9% identity in 270 aa overlap); Q9X1T2|TM1596 from Thermotoga maritima (265 aa), FASTA scores: opt: 584, E(): 1.1e-27, (39.55% identity in 263 aa overlap); etc. BELONGS TO THE PNP/MTAP FAMILY 2 OF PHOSPHORYLASES. Protein product from Mb3335 detected using SWATH mass spectrometry. Mb3335 found to be expressed during exponential growth in Sauton's minimal media by RNA-sequencing.

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002945.4 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009360696.1 PROBABLE PURINE NUCLEOSIDE PHOSPHORYLASE DEOD (INOSINE PHOSPHORYLASE) (PNP) [Mycobacterium bovis AF2122/97]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0A539.1