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Lsm12a LSM12 homolog a [ Drosophila melanogaster (fruit fly) ]

Gene ID: 32167, updated on 10-May-2024

Summary

Official Symbol
Lsm12aprovided by FlyBase
Official Full Name
LSM12 homolog aprovided by FlyBase
Primary source
FLYBASE:FBgn0030364
Locus tag
Dmel_CG15735
See related
AllianceGenome:FB:FBgn0030364
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:LD05893; CG15735; Dmel\CG15735; Lsm12
Summary
Predicted to be involved in RNA metabolic process. Predicted to be located in nucleus. Is expressed in organism. Orthologous to human LSM12 (LSM12 homolog). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Lsm12a in Genome Data Viewer
Location:
11A1-11A1; 1-38 cM
Exon count:
5
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (12018640..12020719)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (11912673..11914752)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene regucalcin Neighboring gene Chromatin accessibility complex 16kD protein Neighboring gene Transport and Golgi organization 4 Neighboring gene Ubiquitin-specific protease 7

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in RNA metabolic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
LSM12 homolog a
Names
CG15735-PA
LSM12 homolog
Lsm12a-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    12018640..12020719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132549.3NP_572777.2  LSM12 homolog a [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572777.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8T0F6, Q9VYR0
    Related
    FBpp0073458
    Conserved Domains (2) summary
    cd01735
    Location:1473
    LSm12_N; Like-Sm protein 12, N-terminal domain
    smart00995
    Location:84175
    AD; Anticodon-binding domain