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aldob aldolase b, fructose-bisphosphate [ Danio rerio (zebrafish) ]

Gene ID: 321664, updated on 13-Jun-2020

Summary

Official Symbol
aldobprovided by ZNC
Official Full Name
aldolase b, fructose-bisphosphateprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-383
See related
Ensembl:ENSDARG00000053684
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fb25f09; wu:fb25f09
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See aldob in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (21106446..21115194)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (20809201..20817949)
103 previous assembly Zv9 (GCF_000002035.4) 14 NC_007125.5 (22107713..22116461)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene si:dkey-74k8.3 Neighboring gene ring finger protein 20, E3 ubiquitin protein ligase Neighboring gene si:dkey-74k8.4 Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene zgc:136929

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
catalytic activity IEA
Inferred from Electronic Annotation
more info
 
fructose-1-phosphate aldolase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
fructose-bisphosphate aldolase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
fructose-bisphosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 
lyase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
fructose 1,6-bisphosphate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glycolytic process IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
glycolytic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
fructose-bisphosphate aldolase B
Names
liver-type aldolase
NP_919348.3

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_194367.3NP_919348.3  fructose-bisphosphate aldolase B

    See identical proteins and their annotated locations for NP_919348.3

    Status: PROVISIONAL

    Source sequence(s)
    AY394965
    UniProtKB/Swiss-Prot
    Q8JH71
    Related
    ENSDARP00000070225.5, ENSDART00000075744.7
    Conserved Domains (1) summary
    pfam00274
    Location:15364
    Glycolytic; Fructose-bisphosphate aldolase class-I

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    21106446..21115194
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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