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Zswim9 zinc finger SWIM-type containing 9 [ Mus musculus (house mouse) ]

Gene ID: 321008, updated on 5-Mar-2024

Summary

Official Symbol
Zswim9provided by MGI
Official Full Name
zinc finger SWIM-type containing 9provided by MGI
Primary source
MGI:MGI:2447816
See related
Ensembl:ENSMUSG00000070814 AllianceGenome:MGI:2447816
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
6330408A02Rik
Summary
Acts upstream of or within hematopoietic progenitor cell differentiation. Orthologous to human ZSWIM9 (zinc finger SWIM-type containing 9). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 3.7), CNS E14 (RPKM 2.8) and 28 other tissues See more
Orthologs
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Genomic context

See Zswim9 in Genome Data Viewer
Location:
7 A1; 7 7.82 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (12992894..13012647, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (13258967..13278721, complement)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 89 Neighboring gene STARR-seq mESC enhancer starr_18077 Neighboring gene vomeronasal 1 receptor, pseudogene 69 Neighboring gene STARR-positive B cell enhancer ABC_E4896 Neighboring gene ligase I, DNA, ATP-dependent Neighboring gene STARR-seq mESC enhancer starr_18078 Neighboring gene phospholipase A2, group IVC (cytosolic, calcium-independent) Neighboring gene ribosomal protein S8, pseudogene 4 Neighboring gene phospholipase A2, group IVC (cytosolic, calcium-independent), pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
uncharacterized protein ZSWIM9
Names
uncharacterized protein C19orf68 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177312.4NP_796286.2  uncharacterized protein ZSWIM9

    See identical proteins and their annotated locations for NP_796286.2

    Status: VALIDATED

    Source sequence(s)
    BC075681, CV783961
    UniProtKB/TrEMBL
    A0A0R4J1C4
    Related
    ENSMUSP00000104172.5, ENSMUST00000108532.11

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    12992894..13012647 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)