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Sertm2 serine rich and transmembrane domain containing 2 [ Mus musculus (house mouse) ]

Gene ID: 319764, updated on 17-Jan-2023

Summary

Official Symbol
Sertm2provided by MGI
Official Full Name
serine rich and transmembrane domain containing 2provided by MGI
Primary source
MGI:MGI:2442684
See related
Ensembl:ENSMUSG00000085139 AllianceGenome:MGI:2442684
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
A730046J19Rik
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle. Orthologous to human SERTM2 (serine rich and transmembrane domain containing 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Sertm2 in Genome Data Viewer
Location:
X; X F2
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) X NC_000086.8 (142936691..142949270)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (144153695..144166274)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 33039 Neighboring gene predicted gene 15048 Neighboring gene ribosomal protein, large, P0 pseudogene Neighboring gene predicted gene 8202

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Homology

Gene Ontology Provided by MGI

Component Evidence Code Pubs
is_active_in intracellular membrane-bounded organelle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
serine-rich and transmembrane domain-containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001354493.1NP_001341422.1  serine-rich and transmembrane domain-containing 2

    Status: VALIDATED

    Source sequence(s)
    AK039668, AK044075, CO044022
    Consensus CDS
    CCDS90758.1
    UniProtKB/Swiss-Prot
    A0A1B0GSN8
    UniProtKB/TrEMBL
    A0A8C6H5K3
    Related
    ENSMUSP00000148011.2, ENSMUST00000135687.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    142936691..142949270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)