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VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene) [ Homo sapiens (human) ]

Gene ID: 317705, updated on 1-Jun-2020

Summary

Official Symbol
VN1R5provided by HGNC
Official Full Name
vomeronasal 1 receptor 5 (gene/pseudogene)provided by HGNC
Primary source
HGNC:HGNC:19870
See related
Ensembl:ENSG00000197617
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
V1RL5
Orthologs

Genomic context

See VN1R5 in Genome Data Viewer
Location:
1q44
Exon count:
1
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (247256072..247257145)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (247419374..247420447)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene heat shock protein family A (Hsp70) member 8 pseudogene Neighboring gene vomeronasal 1 receptor 17 pseudogene Neighboring gene uncharacterized LOC105373273 Neighboring gene zinc finger protein 496 Neighboring gene Sharpr-MPRA regulatory region 5917

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
pheromone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
response to pheromone IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
vomeronasal type-1 receptor 5
Names
G-protein coupled receptor GPCR26
V1R-like 5
V1r-like receptor 5
hGPCR26
pheromone receptor

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173858.1NP_776257.1  vomeronasal type-1 receptor 5

    See identical proteins and their annotated locations for NP_776257.1

    Status: VALIDATED

    Source sequence(s)
    AY114735
    Consensus CDS
    CCDS86062.1
    UniProtKB/Swiss-Prot
    Q7Z5H4
    Conserved Domains (1) summary
    cd13949
    Location:43336
    7tm_V1R_pheromone; vomeronasal organ pheromone receptor type-1 family, member of the seven-transmembrane G protein-coupled receptor superfamily

RNA

  1. NR_160309.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1, non-coding) contains a polymorphic nt that creates an early termination codon compared to variant 1, coding. The resulting transcript is considered to be non-protein coding since it is a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AC104335
    Related
    ENST00000472952.3

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    247256072..247257145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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