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VN1R3 vomeronasal 1 receptor 3 [ Homo sapiens (human) ]

Gene ID: 317702, updated on 13-May-2022

Summary

Official Symbol
VN1R3provided by HGNC
Official Full Name
vomeronasal 1 receptor 3provided by HGNC
Primary source
HGNC:HGNC:19867
See related
AllianceGenome:HGNC:19867
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
V1RL3; FKSG46; V1RL3p
Summary
Predicted to enable pheromone receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and response to pheromone. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See VN1R3 in Genome Data Viewer
Location:
16p11.2
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (31807585..31808853, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (32194951..32196219, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (31818906..31820174, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor 67 pseudogene Neighboring gene protein phosphatase 2 catalytic subunit beta pseudogene 1 Neighboring gene RNA binding motif protein 22 pseudogene 13 Neighboring gene Sharpr-MPRA regulatory region 3948 Neighboring gene zinc finger protein 267

Genomic regions, transcripts, and products

General gene information

Markers

Homology

Clone Names

  • MGC129709, MGC129710

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables pheromone receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in response to pheromone IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
vomeronasal type-1 receptor 3
Names
V1R-like 3
V1RL3 pseudogene
V1r-like receptor 3
vomeronasal 1 receptor 3 pseudogene
vomeronasal 1 receptor 4 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174980.2NP_778145.2  vomeronasal type-1 receptor 3

    Status: VALIDATED

    Description
    Transcript Variant: This transcript represents the functional allele encoding the full-length protein.
    Source sequence(s)
    AF336873, BC107074
    UniProtKB/Swiss-Prot
    Q9BXE9
    Conserved Domains (1) summary
    cd13949
    Location:8300
    7tm_V1R_pheromone; vomeronasal organ pheromone receptor type-1 family, member of the seven-transmembrane G protein-coupled receptor superfamily

RNA

  1. NR_171047.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1, non-coding) contains an indel in the CDS relative to the genome that creates a protein with shorter, unsupported N-terminus compared to variant 1.
    Source sequence(s)
    AC002519

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    31807585..31808853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    32194951..32196219 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_005664.3: Suppressed sequence

    Description
    NG_005664.3: This RefSeq was removed because it is now thought that this gene does encode a protein.