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ctp cut up [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31405, updated on 26-Aug-2021

Summary

Official Symbol
ctpprovided by FlyBase
Official Full Name
cut upprovided by FlyBase
Primary source
FLYBASE:FBgn0011760
Locus tag
Dmel_CG6998
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-WO03040301.128; Cdlc1; CG6998; Ctp; Ddlc-1; ddlc1; Ddlc1; DdlC1; dDYNLL1; dlc; Dlc; DLC8; Dmel\CG6998; l(1)G0153; l(1)G0204; l(1)G0207; l(1)G0244; l(1)G0248; l(1)G0338; l(1)G0371; l(1)G0387; l(1)G0432; l(1)G0445; LC8; lincRNA.S8635
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Genomic context

See ctp in Genome Data Viewer
Location:
4C13-4C14; 1-8 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4687800..4702034)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4581833..4596067)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene fizzy-related Neighboring gene Protein phosphatase 2C Neighboring gene Pyruvate dehydrogenase E1 alpha subunit Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the ctp gene: The ctp gene is conserved in human, chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, S.pombe, M.oryzae, rice, and frog.
  • Orthologs

mobile_element

  • Loc: 4688368-4688628 mobile_element_type = transposon:HMS-Beagle{}2418

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables dynein intermediate chain binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables dynein light intermediate chain binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables dynein light intermediate chain binding IDA
Inferred from Direct Assay
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in centriole IDA
Inferred from Direct Assay
more info
PubMed 
part_of cytoplasmic dynein complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of cytoplasmic dynein complex IDA
Inferred from Direct Assay
more info
PubMed 
part_of dynein complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of dynein complex IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
cut up
Names
8kd dynein light chain
CG6998-PA
CG6998-PB
CG6998-PC
CG6998-PE
CG6998-PF
Cut up
ctp-PA
ctp-PB
ctp-PC
ctp-PE
ctp-PF
cytoplasmic dynein
cytoplasmic dynein 8kD light chain
cytoplasmic dynein light chain 1
dynein
dynein light chain
dynein light chain 1
dynein light chain 8
dynein light chain LC8
dynein light-chain
dynein light-chain 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    4687800..4702034
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_167014.3NP_726942.1  cut up, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726942.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q24117
    UniProtKB/TrEMBL
    M9NDP1
    Related
    FBpp0070672, FBtr0070704
    Conserved Domains (1) summary
    cd21452
    Location:588
    DLC-like_DYNLL1_DYNLL2; dynein light chain (DLC)-like domain found in the cytoplasmic dynein light chain 1 (DYNLL1) family
  2. NM_167015.3NP_726943.1  cut up, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_726943.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q24117
    UniProtKB/TrEMBL
    M9NDP1
    Related
    FBpp0070675, FBtr0070707
    Conserved Domains (1) summary
    cd21452
    Location:588
    DLC-like_DYNLL1_DYNLL2; dynein light chain (DLC)-like domain found in the cytoplasmic dynein light chain 1 (DYNLL1) family
  3. NM_001258601.3NP_001245530.1  cut up, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001245530.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q24117
    UniProtKB/TrEMBL
    M9NDP1
    Related
    FBpp0297908, FBtr0307065
    Conserved Domains (1) summary
    cd21452
    Location:588
    DLC-like_DYNLL1_DYNLL2; dynein light chain (DLC)-like domain found in the cytoplasmic dynein light chain 1 (DYNLL1) family
  4. NM_001370042.1NP_001356933.1  cut up, isoform F [Drosophila melanogaster]

    Status: REVIEWED

    Related
    FBpp0423173, FBtr0474174
    Conserved Domains (1) summary
    PTZ00059
    Location:189
    PTZ00059; dynein light chain; Provisional
  5. NM_080336.5NP_525075.1  cut up, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_525075.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q24117
    UniProtKB/TrEMBL
    M9NDP1
    Related
    FBpp0070674, FBtr0070706
    Conserved Domains (1) summary
    cd21452
    Location:588
    DLC-like_DYNLL1_DYNLL2; dynein light chain (DLC)-like domain found in the cytoplasmic dynein light chain 1 (DYNLL1) family
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