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psbM photosystem II protein M [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 3131419, updated on 26-Jun-2025
Gene symbol
psbM
Gene description
photosystem II protein M
Locus tag
OrsajCp013
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Oryza sativa Japonica Group (cultivar: Nipponbare)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See psbM in Genome Data Viewer
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) Plastid (non-nuclear) NC_001320.1 (16685..16789)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) Plastid (non-nuclear) NC_001320.1 (16685..16789)

NC_001320.1Genomic Context describing neighboring genes Neighboring gene tRNA-Tyr Neighboring gene tRNA-Asp Neighboring gene cytochrome b6/f complex subunit VIII Neighboring gene tRNA-Cys

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Hiratsuka J, et al. Mol Gen Genet, 1989 Jun. PMID 2770692
  2. A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae). Morton BR, et al. Curr Genet, 1993 Oct. PMID 8252646
  3. Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes. Shimada H, et al. Nucleic Acids Res, 1991 Mar 11. PMID 1708498, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
photosystem II protein M

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001320.1 Reference assembly

    Range
    16685..16789
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_039371.1 photosystem II protein M (plastid) [Oryza sativa Japonica Group]

    See identical proteins and their annotated locations for NP_039371.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0C411, P0C412, P0C413, P12169, P62110, Q6QXV8
    UniProtKB/TrEMBL
    A0A0K0LL13, A0A0N9E0H0, A0A0N9E0P5, A0A7S8BAR9, J7EXK8, Q7G678, Q7G7B9
    Conserved Domains (1) summary
    PLN00085
    Location:2 → 34
    PLN00085; photosystem II reaction center protein M (PsbM); Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C413.1

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