U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

psbD photosystem II protein D2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 3131412, updated on 21-Apr-2025
Gene symbol
psbD
Gene description
photosystem II protein D2
Locus tag
OrsajCp008
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Oryza sativa Japonica Group (cultivar: Nipponbare)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Try the new Gene page
Try the new Transcripts and proteins table
See psbD in Genome Data Viewer
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) Plastid (non-nuclear) NC_001320.1 (8900..9961)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) Plastid (non-nuclear) NC_001320.1 (8900..9961)

NC_001320.1Genomic Context describing neighboring genes Neighboring gene tRNA-Ser Neighboring gene hypothetical protein Neighboring gene photosystem II 44 kDa protein Neighboring gene tRNA-Ser Neighboring gene photosystem II protein Z

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Hiratsuka J, et al. Mol Gen Genet, 1989 Jun. PMID 2770692
  2. A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae). Morton BR, et al. Curr Genet, 1993 Oct. PMID 8252646
  3. Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes. Shimada H, et al. Nucleic Acids Res, 1991 Mar 11. PMID 1708498, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
photosystem II protein D2

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001320.1 Reference assembly

    Range
    8900..9961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_039366.1 photosystem II protein D2 (plastid) [Oryza sativa Japonica Group]

    See identical proteins and their annotated locations for NP_039366.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0C435, P0C436, P0C437, P12095, Q6QY23, Q6QY86
    UniProtKB/TrEMBL
    A0A0K0LK47, A0A0K0LQS9, A0A0N9E0H2, A0A0N9E0N3, A0A7S8BBC5, J7EYM0, Q6Z1U4, Q7F4T1
    Conserved Domains (1) summary
    PLN00074
    Location:1 → 353
    PLN00074; photosystem II D2 protein (PsbD); Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C437.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials