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psbA photosystem II protein D1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 3131409, updated on 21-Apr-2025
Gene symbol
psbA
Gene description
photosystem II protein D1
Locus tag
OrsajCp002
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Oryza sativa Japonica Group (cultivar: Nipponbare)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See psbA in Genome Data Viewer
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) Plastid (non-nuclear) NC_001320.1 (82..1143, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) Plastid (non-nuclear) NC_001320.1 (82..1143, complement)

NC_001320.1Genomic Context describing neighboring genes Neighboring gene tRNA-Lys Neighboring gene maturase K Neighboring gene ribosomal protein S16

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Hiratsuka J, et al. Mol Gen Genet, 1989 Jun. PMID 2770692
  2. A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae). Morton BR, et al. Curr Genet, 1993 Oct. PMID 8252646
  3. Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes. Shimada H, et al. Nucleic Acids Res, 1991 Mar 11. PMID 1708498, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
photosystem II protein D1

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001320.1 Reference assembly

    Range
    82..1143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_039360.1 photosystem II protein D1 (plastid) [Oryza sativa Japonica Group]

    See identical proteins and their annotated locations for NP_039360.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P0C432, P0C433, P0C434, P12094, Q6QY90, Q7DNA9
    UniProtKB/TrEMBL
    A0A0K0LK42, A0A0K0LQV1, A0A0N6WZT9, A0A0N9E0Y6, A0A7S7YA90, J7EYL8, Q0JEM7, Q7G3H9, Q8S6H1
    Conserved Domains (1) summary
    TIGR01151
    Location:1 → 353
    psbA; photosystem II, DI subunit (also called Q(B))
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C434.1

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