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petA cytochrome f [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 3131402, updated on 21-Apr-2025
Gene symbol
petA
Gene description
cytochrome f
Locus tag
OrsajCp041
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Oryza sativa Japonica Group (cultivar: Nipponbare)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See petA in Genome Data Viewer
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) Plastid (non-nuclear) NC_001320.1 (59601..60563)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) Plastid (non-nuclear) NC_001320.1 (59601..60563)

NC_001320.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene envelope membrane protein Neighboring gene photosystem II protein J Neighboring gene photosystem II protein L

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Hiratsuka J, et al. Mol Gen Genet, 1989 Jun. PMID 2770692
  2. A chloroplast DNA mutational hotspot and gene conversion in a noncoding region near rbcL in the grass family (Poaceae). Morton BR, et al. Curr Genet, 1993 Oct. PMID 8252646
  3. The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein α -Subunit. Biswal AK, et al. Proteomics, 2019 May. PMID 30866160
  4. Fine structural features of the chloroplast genome: comparison of the sequenced chloroplast genomes. Shimada H, et al. Nucleic Acids Res, 1991 Mar 11. PMID 1708498, Free PMC Article

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Preferred Names
cytochrome f
NP_039399.1
  • component of cytochrome b6/f complex

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001320.1 Reference assembly

    Range
    59601..60563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_039399.1 cytochrome f (plastid) [Oryza sativa Japonica Group]

    See identical proteins and their annotated locations for NP_039399.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P07888, P0C387, P0C388, P0C389, Q6QXT8, Q6QY65
    UniProtKB/TrEMBL
    A0A0K0LKT5, A0A0K0LQX3, A0A0N9E0P9, A0A0N9E0Q6, A0A7S8BBE8, J3R7T8, Q6Z501, Q7F2L6, Q7F5Z8, Q7G7B3
    Conserved Domains (1) summary
    CHL00037
    Location:1 → 320
    petA; cytochrome f
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0C389.1

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