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Gpr19 G protein-coupled receptor 19 [ Rattus norvegicus (Norway rat) ]

Gene ID: 312787, updated on 2-Oct-2018

Summary

Official Symbol
Gpr19provided by RGD
Official Full Name
G protein-coupled receptor 19provided by RGD
Primary source
RGD:71045
See related
Ensembl:ENSRNOG00000007126
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
orphan G-protein coupled receptor, similar to D2 dopamine and adrenergic receptors [RGD, Feb 2006]
Expression
Biased expression in Thymus (RPKM 18.3), Brain (RPKM 15.8) and 9 other tissues See more
Orthologs

Genomic context

See Gpr19 in Genome Data Viewer
Location:
4q43
Exon count:
6
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (168639930..168668345, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 4 NC_005103.3 (232913202..232941493, complement)

Chromosome 4 - NC_005103.4Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102551557 Neighboring gene cAMP responsive element binding protein-like 2 Neighboring gene uncharacterized LOC108350781 Neighboring gene cyclin-dependent kinase inhibitor 1B Neighboring gene proteasome maturation protein pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
probable G-protein coupled receptor 19

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_080579.1NP_542146.1  probable G-protein coupled receptor 19

    See identical proteins and their annotated locations for NP_542146.1

    Status: PROVISIONAL

    Source sequence(s)
    BC089971
    UniProtKB/Swiss-Prot
    P70585
    Related
    ENSRNOP00000009341.4, ENSRNOT00000009341.5
    Conserved Domains (2) summary
    pfam00001
    Location:82330
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:72258
    7tm_4; Olfactory receptor

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005103.4 Reference Rnor_6.0 Primary Assembly

    Range
    168639930..168668345 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006237522.3XP_006237584.1  probable G-protein coupled receptor 19 isoform X1

    Conserved Domains (2) summary
    pfam00001
    Location:105353
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:95281
    7tm_4; Olfactory receptor
  2. XM_017592662.1XP_017448151.1  probable G-protein coupled receptor 19 isoform X2

    UniProtKB/Swiss-Prot
    P70585
    Conserved Domains (2) summary
    pfam00001
    Location:82330
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:72258
    7tm_4; Olfactory receptor
  3. XM_017592661.1XP_017448150.1  probable G-protein coupled receptor 19 isoform X2

    UniProtKB/Swiss-Prot
    P70585
    Conserved Domains (2) summary
    pfam00001
    Location:82330
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:72258
    7tm_4; Olfactory receptor
  4. XM_017592659.1XP_017448148.1  probable G-protein coupled receptor 19 isoform X2

    UniProtKB/Swiss-Prot
    P70585
    Conserved Domains (2) summary
    pfam00001
    Location:82330
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:72258
    7tm_4; Olfactory receptor
  5. XM_017592660.1XP_017448149.1  probable G-protein coupled receptor 19 isoform X2

    UniProtKB/Swiss-Prot
    P70585
    Conserved Domains (2) summary
    pfam00001
    Location:82330
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:72258
    7tm_4; Olfactory receptor
  6. XM_006237524.2XP_006237586.1  probable G-protein coupled receptor 19 isoform X2

    See identical proteins and their annotated locations for XP_006237586.1

    UniProtKB/Swiss-Prot
    P70585
    Conserved Domains (2) summary
    pfam00001
    Location:82330
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:72258
    7tm_4; Olfactory receptor

Alternate Rn_Celera

Genomic

  1. AC_000072.1 Alternate Rn_Celera

    Range
    156308640..156325371 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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