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Adipor2 adiponectin receptor 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 312670, updated on 9-Sep-2018

Summary

Official Symbol
Adipor2provided by RGD
Official Full Name
adiponectin receptor 2provided by RGD
Primary source
RGD:1307891
See related
Ensembl:ENSRNOG00000007990
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Muscle (RPKM 685.2), Liver (RPKM 620.4) and 9 other tissues See more
Orthologs

Genomic context

See Adipor2 in Genome Data Viewer
Location:
4q42
Exon count:
11
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (151412135..151480108, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 4 NC_005103.3 (217327044..217392865, complement)

Chromosome 4 - NC_005103.4Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel subunit alpha1 C Neighboring gene calcium voltage-gated channel auxiliary subunit alpha2delta 4 Neighboring gene decapping mRNA 1B Neighboring gene leucine-rich repeats and transmembrane domains 2 Neighboring gene Wnt family member 5B Neighboring gene F-box and leucine-rich repeat protein 14

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
adipokinetic hormone receptor activity IEA
Inferred from Electronic Annotation
more info
 
adipokinetic hormone receptor activity ISO
Inferred from Sequence Orthology
more info
 
adiponectin binding IEA
Inferred from Electronic Annotation
more info
 
adiponectin binding ISO
Inferred from Sequence Orthology
more info
 
identical protein binding IEA
Inferred from Electronic Annotation
more info
 
identical protein binding ISO
Inferred from Sequence Orthology
more info
 
protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 
protein heterodimerization activity ISO
Inferred from Sequence Orthology
more info
 
signaling receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
signaling receptor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
adiponectin-activated signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
adiponectin-activated signaling pathway ISO
Inferred from Sequence Orthology
more info
 
female pregnancy IEP
Inferred from Expression Pattern
more info
PubMed 
glucose homeostasis IEA
Inferred from Electronic Annotation
more info
 
glucose homeostasis ISO
Inferred from Sequence Orthology
more info
 
heart development IEP
Inferred from Expression Pattern
more info
PubMed 
negative regulation of cell growth IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of cold-induced thermogenesis ISO
Inferred from Sequence Orthology
more info
 
positive regulation of cold-induced thermogenesis ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
positive regulation of glucose import IMP
Inferred from Mutant Phenotype
more info
PubMed 
response to nutrient IEP
Inferred from Expression Pattern
more info
PubMed 
vascular wound healing IEA
Inferred from Electronic Annotation
more info
 
vascular wound healing ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
intrinsic component of plasma membrane IEA
Inferred from Electronic Annotation
more info
 
intrinsic component of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
adiponectin receptor protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037979.1NP_001033068.1  adiponectin receptor protein 2

    See identical proteins and their annotated locations for NP_001033068.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ148392
    UniProtKB/TrEMBL
    Q3YAF7
    Related
    ENSRNOP00000010556.3, ENSRNOT00000010556.5
    Conserved Domains (1) summary
    pfam03006
    Location:140363
    HlyIII; Haemolysin-III related

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005103.4 Reference Rnor_6.0 Primary Assembly

    Range
    151412135..151480108 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006237183.2XP_006237245.1  adiponectin receptor protein 2 isoform X1

    See identical proteins and their annotated locations for XP_006237245.1

    UniProtKB/TrEMBL
    G3V707
    Conserved Domains (1) summary
    pfam03006
    Location:140363
    HlyIII; Haemolysin-III related
  2. XM_006237184.3XP_006237246.1  adiponectin receptor protein 2 isoform X1

    See identical proteins and their annotated locations for XP_006237246.1

    UniProtKB/TrEMBL
    G3V707
    Conserved Domains (1) summary
    pfam03006
    Location:140363
    HlyIII; Haemolysin-III related
  3. XM_006237186.3XP_006237248.1  adiponectin receptor protein 2 isoform X1

    See identical proteins and their annotated locations for XP_006237248.1

    UniProtKB/TrEMBL
    G3V707
    Conserved Domains (1) summary
    pfam03006
    Location:140363
    HlyIII; Haemolysin-III related
  4. XM_006237185.3XP_006237247.1  adiponectin receptor protein 2 isoform X1

    See identical proteins and their annotated locations for XP_006237247.1

    UniProtKB/TrEMBL
    G3V707
    Conserved Domains (1) summary
    pfam03006
    Location:140363
    HlyIII; Haemolysin-III related

Alternate Rn_Celera

Genomic

  1. AC_000072.1 Alternate Rn_Celera

    Range
    141389717..141403635 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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