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Bmyc brain expressed myelocytomatosis oncogene [ Rattus norvegicus (Norway rat) ]

Gene ID: 311807, updated on 17-Aug-2024

Summary

Official Symbol
Bmycprovided by RGD
Official Full Name
brain expressed myelocytomatosis oncogeneprovided by RGD
Primary source
RGD:1584970
See related
EnsemblRapid:ENSRNOG00000042556 AllianceGenome:RGD:1584970
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Mycb; B-myc
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in positive regulation of cell population proliferation and regulation of transcription by RNA polymerase II. Predicted to be located in nucleus and spindle. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Bmyc in Genome Data Viewer
Location:
3p13
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 3 NC_086021.1 (28910689..28911448)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 3 NC_051338.1 (8512569..8513328)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 3 NC_005102.4 (2916662..2917421)

Chromosome 3 - NC_086021.1Genomic Context describing neighboring genes Neighboring gene lipocalin 10 Neighboring gene odorant binding protein 2A Neighboring gene eukaryotic translation initiation factor 4E, pseudogene 5 Neighboring gene progestagen associated endometrial protein like 1 Neighboring gene progestagen associated endometrial protein

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein B-Myc
Names
Bmyc protein (AA 1-178)
avian myelocytomatosis viral (v-myc) related oncogene
transforming protein B-Myc

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013163.2NP_001013181.2  protein B-Myc

    See identical proteins and their annotated locations for NP_001013181.2

    Status: PROVISIONAL

    Source sequence(s)
    DQ191784
    UniProtKB/Swiss-Prot
    P15063, Q3HVJ5
    UniProtKB/TrEMBL
    A6JTA3
    Related
    ENSRNOP00000059721.1, ENSRNOT00000064358.3
    Conserved Domains (1) summary
    pfam01056
    Location:6159
    Myc_N; Myc amino-terminal region

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086021.1 Reference GRCr8

    Range
    28910689..28911448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)