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Art1 ADP-ribosyltransferase 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 308873, updated on 18-Apr-2019

Summary

Official Symbol
Art1provided by RGD
Official Full Name
ADP-ribosyltransferase 1provided by RGD
Primary source
RGD:1304591
See related
Ensembl:ENSRNOG00000020251
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Restricted expression toward (RPKM 689.3) See more
Orthologs

Genomic context

See Art1 in Genome Data Viewer
Location:
1q32
Exon count:
4
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (167202064..167206615)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 1 NC_005100.3 (173386426..173395510)

Chromosome 1 - NC_005100.4Genomic Context describing neighboring genes Neighboring gene ring finger protein 121 Neighboring gene short transient receptor potential channel 2-like Neighboring gene 60S ribosomal protein L7a pseudogene Neighboring gene transient receptor potential cation channel, subfamily C, member 2, pseudogene Neighboring gene ADP-ribosyltransferase 5 Neighboring gene cholinergic receptor nicotinic alpha 10 subunit Neighboring gene nucleoporin 98 Neighboring gene glutathione peroxidase 4, pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
NAD(P)+-protein-arginine ADP-ribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
NAD+ ADP-ribosyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
NAD+ ADP-ribosyltransferase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
Process Evidence Code Pubs
peptidyl-arginine ADP-ribosylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein ADP-ribosylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein ADP-ribosylation ISO
Inferred from Sequence Orthology
more info
PubMed 
Component Evidence Code Pubs
anchored component of membrane IEA
Inferred from Electronic Annotation
more info
 
anchored component of membrane ISO
Inferred from Sequence Orthology
more info
PubMed 
cell surface IEA
Inferred from Electronic Annotation
more info
 
cell surface ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1
NP_001101011.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107541.2NP_001101011.1  GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1 precursor

    See identical proteins and their annotated locations for NP_001101011.1

    Status: VALIDATED

    Source sequence(s)
    AABR07004912
    UniProtKB/TrEMBL
    D3ZJK0
    Related
    ENSRNOP00000027427.5, ENSRNOT00000027427.6
    Conserved Domains (1) summary
    pfam01129
    Location:39269
    ART; NAD:arginine ADP-ribosyltransferase

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005100.4 Reference Rnor_6.0 Primary Assembly

    Range
    167202064..167206615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000069.1 Alternate Rn_Celera

    Range
    154550953..154555504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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