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BF3209 alpha-amylase precursor [ Bacteroides fragilis YCH46 ]

Gene ID: 3083111, updated on 27-Aug-2016
Gene symbol
BF3209
Gene description
alpha-amylase precursor
Locus tag
BF3209
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacteroides fragilis YCH46 (strain: YCH46)
Lineage
Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
Sequence:
NC_006347.1 (3636718..3638163)

NC_006347.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 3-oxoacyl-[acyl-carrier-protein] synthase III Neighboring gene putative serum resistance protein BrkB Neighboring gene hypothetical protein

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Names
alpha-amylase precursor
YP_100488.1
  • similar to gp:AE016946_75 [Bacteroides thetaiotaomicron VPI-5482], percent identity 87 in 481 aa, BLASTP E(): 0.0

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006347.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_100488.1 alpha-amylase precursor [Bacteroides fragilis YCH46]

    See identical proteins and their annotated locations for YP_100488.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q64RC7
    Conserved Domains (3) summary
    cd11318
    Location:3390
    AmyAc_bac_fung_AmyA; Alpha amylase catalytic domain found in bacterial and fungal Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)
    PRK09441
    Location:1478
    PRK09441; cytoplasmic alpha-amylase; Reviewed
    pfam09154
    Location:427477
    DUF1939; Domain of unknown function (DUF1939)
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