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Ammecr1l AMMECR1 like [ Rattus norvegicus (Norway rat) ]

Gene ID: 307526, updated on 5-Sep-2025
Official Symbol
Ammecr1lprovided by RGD
Official Full Name
AMMECR1 likeprovided by RGD
Primary source
RGD:1307915
See related
Ensembl:ENSRNOG00000016250 AllianceGenome:RGD:1307915
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1307915
Summary
Predicted to be active in nucleus. Orthologous to human AMMECR1L (AMMECR1 like). [provided by Alliance of Genome Resources, Jul 2025]
Expression
Biased expression in Kidney (RPKM 85.3), Liver (RPKM 67.1) and 9 other tissues See more
Orthologs
human mouse all
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See Ammecr1l in Genome Data Viewer
Location:
18p12
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 18 NC_086036.1 (23661649..23685391)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 18 NC_051353.1 (23386114..23411177)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 18 NC_005117.4 (24539530..24563576)

Chromosome 18 - NC_086036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134482923 Neighboring gene solute carrier family 25, member 46 Neighboring gene Sin3A associated protein 130 Neighboring gene uncharacterized LOC100910201 Neighboring gene RNA polymerase II subunit D Neighboring gene WD repeat domain 33 Neighboring gene small nucleolar RNA SNORA21

Go to nucleotide: Graphics FASTA GenBank

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • MGC188040

Gene Ontology Provided by RGD

Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
  
Preferred Names
AMMECR1-like protein
Names
AMME chromosomal region gene 1-like

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107399.1 → NP_001100869.1  AMMECR1-like protein

    See identical proteins and their annotated locations for NP_001100869.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473974
    UniProtKB/TrEMBL
    A6J2N9
    Related
    ENSRNOP00000057790.4, ENSRNOT00000061074.4
    Conserved Domains (1) summary
    pfam01871
    Location:183 → 353
    AMMECR1; AMMECR1

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086036.1 Reference GRCr8

    Range
    23661649..23685391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006254591.5 → XP_006254653.1  AMMECR1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8I6GL02
    Related
    ENSRNOP00000095073.1, ENSRNOT00000094521.2
    Conserved Domains (1) summary
    pfam01871
    Location:183 → 348
    AMMECR1; AMMECR1

  2. XM_039096877.2 → XP_038952805.1  AMMECR1-like protein isoform X3

    Conserved Domains (1) summary
    pfam01871
    Location:184 → 348
    AMMECR1

  3. XM_039096878.2 → XP_038952806.1  AMMECR1-like protein isoform X3

    Conserved Domains (1) summary
    pfam01871
    Location:184 → 348
    AMMECR1

  4. XM_006254590.5 → XP_006254652.1  AMMECR1-like protein isoform X1

    UniProtKB/TrEMBL
    G3V9S2
    Conserved Domains (1) summary
    pfam01871
    Location:173 → 343
    AMMECR1; AMMECR1

RNA

  1. XR_010059577.1 RNA Sequence

  2. XR_361285.5 RNA Sequence

  3. XR_005496041.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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