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fabp2 fatty acid binding protein 2, intestinal [ Danio rerio (zebrafish) ]

Gene ID: 30708, updated on 7-Apr-2019

Summary

Official Symbol
fabp2provided by ZNC
Official Full Name
fatty acid binding protein 2, intestinalprovided by ZNC
Primary source
ZFIN:ZDB-GENE-991019-5
See related
Ensembl:ENSDARG00000006427
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
Also known as
ifabp; I-FABP; zgc:92264
Orthologs

Genomic context

See fabp2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (25848236..25851530)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (25157402..25160701)
103 previous assembly Zv9 (GCF_000002035.4) 1 NC_007112.5 (24705631..24708930)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene guanylate cyclase 1 soluble subunit alpha 1 Neighboring gene guanylate cyclase 1 soluble subunit beta 1 Neighboring gene ubiquitin specific peptidase 53b Neighboring gene myozenin 2b

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General gene information

Markers

Homology

Clone Names

  • MGC92264

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
fatty acid binding IEA
Inferred from Electronic Annotation
more info
 
lipid binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
response to lipid IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
fatty acid-binding protein, intestinal
Names
I-FABP (FABPI)
intestinal fatty acid binding pr
intestinal fatty acid binding protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_131431.1NP_571506.1  fatty acid-binding protein, intestinal

    See identical proteins and their annotated locations for NP_571506.1

    Status: PROVISIONAL

    Source sequence(s)
    AF541953
    UniProtKB/TrEMBL
    Q8AX65
    Related
    ENSDARP00000021241.4, ENSDART00000027973.6
    Conserved Domains (1) summary
    pfam00061
    Location:4132
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    25848236..25851530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005170903.3XP_005170960.1  fatty acid-binding protein, intestinal isoform X1

    Conserved Domains (1) summary
    pfam00061
    Location:4114
    Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394484.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    453379..456273
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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