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Oxnad1 oxidoreductase NAD-binding domain containing 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 306270, updated on 5-Mar-2024

Summary

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Official Symbol
Oxnad1provided by RGD
Official Full Name
oxidoreductase NAD-binding domain containing 1provided by RGD
Primary source
RGD:1311534
See related
Ensembl:ENSRNOG00000019760 AllianceGenome:RGD:1311534
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1311534
Summary
Predicted to enable oxidoreductase activity. Orthologous to human OXNAD1 (oxidoreductase NAD binding domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Heart (RPKM 154.4), Kidney (RPKM 132.3) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
16p16
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (7299755..7328824)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (7293470..7322540)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (8207223..8236292)

Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134482453 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 15 Neighboring gene diphthamide biosynthesis 3 Neighboring gene transfer RNA valine (anticodon AAC) 12 Neighboring gene uncharacterized LOC134482455 Neighboring gene microseminoprotein, beta Neighboring gene poly (ADP-ribose) glycohydrolase like 1 Neighboring gene nuclear receptor coactivator 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. A mitochondrial protein compendium elucidates complex I disease biology. Pagliarini DJ, et al. Cell, 2008 Jul 11. PMID 18614015, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
oxidoreductase NAD-binding domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001107295.1 → NP_001100765.1  oxidoreductase NAD-binding domain-containing protein 1

    See identical proteins and their annotated locations for NP_001100765.1

    Status: PROVISIONAL

    Source sequence(s)
    CH474046
    UniProtKB/TrEMBL
    A6KFX2, D4A0Y4
    Related
    ENSRNOP00000026751.4, ENSRNOT00000026751.7
    Conserved Domains (1) summary
    cd00322
    Location:92 → 331
    FNR_like; Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport ...

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086034.1 Reference GRCr8

    Range
    7299755..7328824
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006252624.5 → XP_006252686.1  oxidoreductase NAD-binding domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006252686.1

    UniProtKB/TrEMBL
    A0A0G2K466, A6KFX3
    Related
    ENSRNOP00000072924.1
    Conserved Domains (1) summary
    cd00322
    Location:68 → 307
    FNR_like; Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport ...

  2. XM_006252625.5 → XP_006252687.1  oxidoreductase NAD-binding domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006252687.1

    UniProtKB/TrEMBL
    A0A0G2K466, A6KFX3
    Conserved Domains (1) summary
    cd00322
    Location:68 → 307
    FNR_like; Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport ...

  3. XM_006252626.5 → XP_006252688.1  oxidoreductase NAD-binding domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006252688.1

    UniProtKB/TrEMBL
    A0A0G2K466, A6KFX3
    Conserved Domains (1) summary
    cd00322
    Location:68 → 307
    FNR_like; Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport ...

  4. XM_063275356.1 → XP_063131426.1  oxidoreductase NAD-binding domain-containing protein 1 isoform X3

  5. XM_006252623.5 → XP_006252685.1  oxidoreductase NAD-binding domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_006252685.1

    UniProtKB/TrEMBL
    A0A0G2K466, A6KFX3
    Conserved Domains (1) summary
    cd00322
    Location:68 → 307
    FNR_like; Ferredoxin reductase (FNR), an FAD and NAD(P) binding protein, was intially identified as a chloroplast reductase activity, catalyzing the electron transfer from reduced iron-sulfur protein ferredoxin to NADP+ as the final step in the electron transport ...

  6. XM_063275355.1 → XP_063131425.1  oxidoreductase NAD-binding domain-containing protein 1 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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