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bmp7a bone morphogenetic protein 7a [ Danio rerio (zebrafish) ]

Gene ID: 30584, updated on 20-Oct-2020

Summary

Official Symbol
bmp7aprovided by ZNC
Official Full Name
bone morphogenetic protein 7aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-000208-25
See related
Ensembl:ENSDARG00000018260
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
s; bmp; sna; bmp7; fb83f09; wu:fb83f09
Orthologs

Genomic context

See bmp7a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (7109332..7139555, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (7099493..7129716, complement)
103 previous assembly Zv9 (GCF_000002035.4) 11 NC_007122.5 (7195487..7226503, complement)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene si:ch211-253b8.5 Neighboring gene uncharacterized LOC101886356 Neighboring gene si:zfos-1451h6.1 Neighboring gene small integral membrane protein 7

Genomic regions, transcripts, and products

Bibliography

Pathways from PubChem

General gene information

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
BMP receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytokine activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
growth factor activity IEA
Inferred from Electronic Annotation
more info
 
identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein heterodimerization activity IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
BMP signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
BMP signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
BMP signaling pathway involved in heart jogging IMP
Inferred from Mutant Phenotype
more info
PubMed 
SMAD protein signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
determination of left/right symmetry IMP
Inferred from Mutant Phenotype
more info
PubMed 
determination of ventral identity IDA
Inferred from Direct Assay
more info
PubMed 
determination of ventral identity IGI
Inferred from Genetic Interaction
more info
PubMed 
determination of ventral identity IMP
Inferred from Mutant Phenotype
more info
PubMed 
dorsal/ventral pattern formation IEP
Inferred from Expression Pattern
more info
PubMed 
dorsal/ventral pattern formation IGI
Inferred from Genetic Interaction
more info
PubMed 
dorsal/ventral pattern formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
embryonic heart tube morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
heart looping IMP
Inferred from Mutant Phenotype
more info
PubMed 
locus ceruleus development IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of endodermal cell fate specification IGI
Inferred from Genetic Interaction
more info
PubMed 
positive regulation of pathway-restricted SMAD protein phosphorylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
post-anal tail morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein-containing complex assembly IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
extracellular region IEA
Inferred from Electronic Annotation
more info
 
extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
bone morphogenetic protein 7a
Names
bone morphogenetic protein 7
snailhouse
snh

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_131321.2NP_571396.1  bone morphogenetic protein 7a precursor

    See identical proteins and their annotated locations for NP_571396.1

    Status: PROVISIONAL

    Source sequence(s)
    AF201379
    UniProtKB/TrEMBL
    Q9PTF9
    Related
    ENSDARP00000017352.7, ENSDART00000016472.9
    Conserved Domains (2) summary
    pfam00019
    Location:329431
    TGF_beta; Transforming growth factor beta like domain
    pfam00688
    Location:34275
    TGFb_propeptide; TGF-beta propeptide

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    7109332..7139555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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