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id1 inhibitor of DNA binding 1, HLH protein [ Danio rerio (zebrafish) ]

Gene ID: 30493, updated on 25-Aug-2020

Summary

Official Symbol
id1provided by ZNC
Official Full Name
inhibitor of DNA binding 1, HLH proteinprovided by ZNC
Primary source
ZFIN:ZDB-GENE-990415-96
See related
Ensembl:ENSDARG00000040764
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
id; id6; cb108; id:ibd11; id:ibd1174; wu:fb57e11
Orthologs

Genomic context

See id1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (18704189..18705297, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (18541847..18542955, complement)
103 previous assembly Zv9 (GCF_000002035.4) 11 NC_007122.5 (19124536..19125612, complement)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene zinc finger, MYND-type containing 8 Neighboring gene nuclear receptor coactivator 3 Neighboring gene uncharacterized LOC110440119 Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2b

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 
transcription regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
circadian regulation of gene expression IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of neurogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
negative regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
regulation of neuron differentiation IGI
Inferred from Genetic Interaction
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
DNA-binding protein inhibitor ID-1
Names
inhibitor of DNA binding 6

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_131245.2NP_571320.2  DNA-binding protein inhibitor ID-1

    See identical proteins and their annotated locations for NP_571320.2

    Status: VALIDATED

    Source sequence(s)
    AI477579, BC071286, EH448502
    UniProtKB/TrEMBL
    Q6IQW5
    Related
    ENSDARP00000059731.3, ENSDART00000059732.5
    Conserved Domains (2) summary
    smart00353
    Location:4892
    HLH; helix loop helix domain
    pfam15020
    Location:2467
    CATSPERD; Cation channel sperm-associated protein subunit delta

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    18704189..18705297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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